Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00432 ATGGTTGTGCAGTCTCTGGACGACGTTGTTCACCAGCAATTGATGGTTTCAGCCACGGCGGAGAAGAGTTCGGAATCCAAAATCGCCGTGACGGCAAATGGCGGGAACGGTGCTAAGTCCGCCGAGAAGAAACTGAGAGAATTATCGGAGGAGGGTTCGACAATGCCGCCGCGGAGGTCGAGTGCGAGGATTCAAGCGTTGCAGAAAGCGGAGGAGGAACTTCTTGCTCGTAAAAGAGCAGAGGGAGTTGAGGAAAAAGACAATTGCAACGATGAGGTGAAGGCTGGGAAGGCGAAGAAGCGCAATAGGAAAAGTAGTAGTGACGGTGAGGAGAGTGTAGTTGTGGAAGTAGAGGTTGTTTCGCCGCCGATGAAAAAAGGGGTGGCCTACCGCAAGGGTAAGGTGGTGGACGGAGTGAATGGAAATGTTAAGGTAGGAGAAGTGAATGGGAAGGAGGGATTGGAAAATGCGGGTGGGGGTTTGGGGGAGAAGAGTGACTTGCTTAAGGTCAAAGAGACGATAAGACTGTTTAATAAGTATTACCTTCATTTAGTTCAGGAAGAAGAAAAGAGGTGTGGGAAGGCAGAGGCTGAGCGGAAAGCTGCTAAAAAGGCTTCAAAATCGAAGAAAGGTGCTCCACCTGAAGAATCAAAGACCACTGCTAAACGACCAGATCTAAAGGCCATGATGGAAAATAATGAGATATTGTACCCTGAGAAAAGAATTGGCAACATTCCAGGTATTGATGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCATTGGTTAAATGGCATTGATTATATGGGCCAGAGCTATGCCAAAGCGTACAGCTATGAACTTCCAGTTGCTGTTGCCATTGTTATTTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTGATAAGCGTCAATTTCGGGATCAAAAGTTGGAGCGTGGTAACTTGGCTCTGAAGAATTGTTCTGAGCAATGTGTGCCTGTTAGAGTCATTCGTGGTCATGAATCTTCAAGCAGTTACACTGGTAAAGTATACACATACGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGGGAAGGGAATATCCGGATTTACAGTCTACAAGTTTAGACTTAGGAGGCTTGAAGGGCAACCTACATTAACTACAAATCAGGTATATTTTACATATGGACGTGTACCTCAATCTCTAACAGAAATACAAGGGTTGGTTTGTGAAGATATCACTGGAGGTCAAGAAGATATGCCCATTCCGGCTACAAATTTGGTTGATGACCCCCCTGTTCCACCCACAGATTTCACATATTGTAAGTCACTCAAGGTTGCAAAAAATGTGAAGCTTCCCATGAATGCCACCGGATGCAAATGTGAAGGCATTTGTAATGACCCAACAAGCTGTGCATGTGCATTGCGTAATGGCTCTGATTTTCCCTATGTATCTCGGGATGGTGGCAGGTTAATTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCCAAATGTGGTTGTGGTCCTGGTTGTGTGAACCGAACGTCTCAAAGAGGACTTAGATATCGTCTGGAGGTTTTCCGTACTGCCAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACCGGAATACTTGCTAGGGCCGAGGATATGGATAGCGTTCTAGAAAACAATTATATTTTTGAGATAGATTGCTTGCAAACTATAAAGGGGCTCGGGGGAAGAGAGCGACGATCACAGGATGGAGAGATTCCTGCAAATCTTTTGGACAAATATCATGATCAATGTTCTGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAATGTGTTTTGAGCACACACGATGATTTGAGATTGGCTCGTATAATGTTGTTTGCTGCAGACAACATACCCCCTTTGCAGGAATTAACATATGACTATGGTTACGTGCTTGATAGCGTGTTGGACTCGGATGGGAAGATTAAGCAAATGCCATGCTACTGTGGAGCCTCAGTCTGCAGGAAGCGATTATTCTAA 2154 0.4461 MVVQSLDDVVHQQLMVSATAEKSSESKIAVTANGGNGAKSAEKKLRELSEEGSTMPPRRSSARIQALQKAEEELLARKRAEGVEEKDNCNDEVKAGKAKKRNRKSSSDGEESVVVEVEVVSPPMKKGVAYRKGKVVDGVNGNVKVGEVNGKEGLENAGGGLGEKSDLLKVKETIRLFNKYYLHLVQEEEKRCGKAEAERKAAKKASKSKKGAPPEESKTTAKRPDLKAMMENNEILYPEKRIGNIPGIDVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYELPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGDKRQFRDQKLERGNLALKNCSEQCVPVRVIRGHESSSSYTGKVYTYDGLYKVVNYWAGKGISGFTVYKFRLRRLEGQPTLTTNQVYFTYGRVPQSLTEIQGLVCEDITGGQEDMPIPATNLVDDPPVPPTDFTYCKSLKVAKNVKLPMNATGCKCEGICNDPTSCACALRNGSDFPYVSRDGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARAEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQDGEIPANLLDKYHDQCSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHDDLRLARIMLFAADNIPPLQELTYDYGYVLDSVLDSDGKIKQMPCYCGASVCRKRLF 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00432 717 MobiDBLite consensus disorder prediction 18 33 - -
Gma16g00432 717 Gene3D SET domain 419 717 IPR046341 -
Gma16g00432 717 Pfam Pre-SET motif 430 530 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00432 717 ProSiteProfiles Pre-SET domain profile. 473 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00432 717 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 58 716 - -
Gma16g00432 717 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 58 717 IPR025794 GO:0016571
Gma16g00432 717 SMART PostSET_3 701 717 IPR003616 -
Gma16g00432 717 SMART set_7 538 693 IPR001214 GO:0005515
Gma16g00432 717 ProSiteProfiles Post-SET domain profile. 701 717 IPR003616 -
Gma16g00432 717 ProSiteProfiles SET domain profile. 538 687 IPR001214 GO:0005515
Gma16g00432 717 Gene3D - 227 411 IPR036987 -
Gma16g00432 717 Coils Coil 185 205 - -
Gma16g00432 717 MobiDBLite consensus disorder prediction 70 111 - -
Gma16g00432 717 SUPERFAMILY PUA domain-like 228 415 IPR015947 -
Gma16g00432 717 ProSiteProfiles YDG domain profile. 243 395 IPR003105 -
Gma16g00432 717 MobiDBLite consensus disorder prediction 18 113 - -
Gma16g00432 717 Pfam SET domain 549 687 IPR001214 GO:0005515
Gma16g00432 717 Pfam SAD/SRA domain 242 399 IPR003105 -
Gma16g00432 717 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 58 716 - -
Gma16g00432 717 SMART G9a_1 238 399 IPR003105 -
Gma16g00432 717 SMART preset_2 426 522 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00432 717 SUPERFAMILY SET domain 424 693 IPR046341 -
Gma16g00432 717 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00432 Gma-Chr16 4599409 4615825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00432 229 717 EF-hand Containing Proteins AT5G13960 67.413 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma16g00432 SAD_SRA 1.7e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00432 K11420 - gmx:100795584 1320.45