Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00400 ATGGGAACCACTTGCCTAGAATCTCCACCAATTCTCCAAGACCCAAGGGTTACTATCCTCGAAACTTCAATGGTTTTTCCATCCAAAGAAACCGAGAAGAGGTCCTTGTTCCTATCAAACATAGACAAGGTCCTCAACTTCGAAGTGGAAACGGTTCACTTCTTTGGAGCAAACGAAGATTTTCCACCCGCAAAAGTGGCCAAGATGTTCAAGAACGCTCTAGAGGAAGCCCTAGTGGTCTATGACTTCTTGGGAGGAAGATTGAATCTGAACCCTGAAACCAAAAGATTAGAGATAGATTGCAATGGAAAGGGTGCTGGGTTTGTGGTGGCTTCAAGTGAGTACAAGTTAAGTGAGATTGGGGACTTGGTTTATCCCAATCCAGCTTTTGCACAATTTGTTCAGAAGAGTAAGGATTTTGTCCAACAAAATGATCAACCACTATGCGTTGCACAGTTGACATCCTTCAAATGTGGAGGCTTTGCAATTGGATTCACAACCAGTCACACCACCTTTGACGGTCTTAGCTTCAAAACATTCTTGGACAACCTCGCCGCATTGGCTGCTAACAAGCCCCTGGCTGTGATACCCTGCCACGACAGACACCTCTTGGCCGCACGATCCCCACCACGTGTCAGCTTCCCGCATCCTGAGCTGATCAAGCTCGATAAGCTACCCACAGGCAGCACCGAGTCCGGGGTCTTCGAGGCTACCAACGAAGAACTCAACTTCAAAGTTTTCCAACTAACCTCACACAACATCCTCAGCCTCAAGGAGAAAGCCAAGGGTAGCACCAACGCCCGTGCCACTGGGTTTAACGTTATCACCGCCCATCTATGGAGATGCAAGGCCTTATCTGCACCCTACGACCCTTCTAGGTCATCCATCATACTATATGCCATGGACATACGTCCACGGTTGAAACCTCCCCTCCCCAAATCCTTCGCGGGCAACGCCGTGTTAACGGCTTATGCCATAGCAAAATGTGAGGAATTGGAAAAGGAAGAGTTCTCAAGGTTGGTGGAGATGGTGACAGAGGGTGCAAAGAGAATGAGTGATGAATATGCTAGGTCTATGATAGATTGGGGAGAGGTGCATAGTGGGTTTCCACATGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAGGAGGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGCCCTGTGGTGTATCACCGGAAGGATATTATTCTAGTGTTTCCTCCTTTTGGTGGAAGTAGTGGTGATGATGATGGGATAAATATTATAGTGGCTCTTCCTCCCAAGGAAATGGACAAATTCGAAAACCTCTTTTACATGTTCTTGAATTGA 1344 0.474 MGTTCLESPPILQDPRVTILETSMVFPSKETEKRSLFLSNIDKVLNFEVETVHFFGANEDFPPAKVAKMFKNALEEALVVYDFLGGRLNLNPETKRLEIDCNGKGAGFVVASSEYKLSEIGDLVYPNPAFAQFVQKSKDFVQQNDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHPELIKLDKLPTGSTESGVFEATNEELNFKVFQLTSHNILSLKEKAKGSTNARATGFNVITAHLWRCKALSAPYDPSRSSIILYAMDIRPRLKPPLPKSFAGNAVLTAYAIAKCEELEKEEFSRLVEMVTEGAKRMSDEYARSMIDWGEVHSGFPHGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILVFPPFGGSSGDDDGINIIVALPPKEMDKFENLFYMFLN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00400 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 444 - -
Gma16g00400 447 Gene3D - 15 220 IPR023213 -
Gma16g00400 447 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 16 444 - -
Gma16g00400 447 Pfam Transferase family 16 443 - -
Gma16g00400 447 Gene3D - 227 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00400 Gma-Chr16 4238104 4241209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00400 16 443 Monolignol Biosynthesis Gene Families AT5G48930 29.978 5.33e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00400 K13065 - gmx:100805510 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00684 19 28089866 28094691 Gma16g00400 16 4238104 4241209 GST