Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00394 ATGCTGAAGCGCCCCGGCCGCCAGGAGTCCCTCGCCGACAAGATCTACCGGTTTCGCGGGACACTGCTCGTCGTCGCGATCCCGCTCCTCCTCATCACATTCGTCCTCTACGTCATGCCGTCCAGCACCTCCAACGAGTCCGTCGGAGACTACGCCCTCGTTAACCGGAAAATGTCCCCCGAAAAGAAATCCGTCGGCTCCTACGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGTCGCGTCCACGTCTTCCATTTCGATCACAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAACTTTTTGTCCAGAAAAAACCAGGTTTGAGTGCGTTCGCTAAGAATCCGAAACAGGCAGCGGAATCTTTGGTTTCGCTTTTGGAGGAAGCGGAGAGTGTTGTTCCTCGTGAATTGCGATCCAAGACACCGGTTCGAGTTGGGGCAACTGCGGGTTTGAGGGCTTTGGAAGGGGATGCTTCGGATAGGATTTTGCAAGCGGTAAGGGATTTGCTTAAGGATAGGAGTAGCCTTAAATCTGAGAGTGATGCAGTTACGGTGCTGGATGGAACACAAGAAGGTGCTTATCAATGGGTTACTATCAACTATCTATTGGGAAACTTGGGAAAGGATTATTCAAAGACTGTTGGGGTTGTTGATCTTGGAGGTGGATCTGTTCAAATGGCTTATGCCATCTCAGAGACAGATGCTGCCATGGCTCCAAAAGTAGTAGATGGTGGGGATCCATATCTCAAGGAGATGTTCCTGAGGGGAAGGAAATACTATCTCTATGTTCACAGttacttgcactatggtttactagctgctcgtgcagagattttaaagatttctgatgatgctgaaaacccttgtgtcatatctggctatgatgGATCCTACAACTATGGAGGAAAGTCGTTtaaggcttcatccggctcttctggtgcaagcttaaatgaatgcaaaagtgttgctcttagggctctcaaagttaatgagtcgacatgtactcatatgaagtgtacttttggtgggatatggaatggtggagggggggatggacagaagaacctttttgttgcctctttcttctttgaccgggctgctgagGCTGGTTTTGCTGATCCAAACTTGCCAGTCGCGATAGTTCGTCCTGCAGATTTTGAGGATGCAGCTAAGCAAGCATGCCAAACAAAACTTGAGAATGCCAAATCCACTTTTCCTCGTGTTGATGAGGGGAACCTTCCCTATCTTTGCATGGATCTTATATACCAGTATACACTACTCGTTGATGGGTTTGGTATATATCCATGGCAAGAGATTACATTGGTGAAGAAAGTTAAATACGACGATGCCCTGGTTGAGGCAGCATGGCCCCTAGGCAGCGCCATTGAAGCTGTGTCATCTGCGTAA 1410 0.3965 MLKRPGRQESLADKIYRFRGTLLVVAIPLLLITFVLYVMPSSTSNESVGDYALVNRKMSPEKKSVGSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGKDLELFVQKKPGLSAFAKNPKQAAESLVSLLEEAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKDRSSLKSESDAVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETDAAMAPKVVDGGDPYLKEMFLRGRKYYLYVHSYLHYGLLAARAEILKISDDAENPCVISGYDGSYNYGGKSFKASSGSSGASLNECKSVALRALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVAIVRPADFEDAAKQACQTKLENAKSTFPRVDEGNLPYLCMDLIYQYTLLVDGFGIYPWQEITLVKKVKYDDALVEAAWPLGSAIEAVSSA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00394 469 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 467 IPR000407 GO:0016787
Gma16g00394 469 PANTHER APYRASE-LIKE PROTEIN 1 468 - -
Gma16g00394 469 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Gma16g00394 469 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Gma16g00394 469 Gene3D Exopolyphosphatase. Domain 2 188 447 - -
Gma16g00394 469 Gene3D - 68 463 - -
Gma16g00394 469 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 468 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00394 Gma-Chr16 4154860 4159686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00394 6 468 Calmodulin-binding Proteins AT3G04080 70.194 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00394 K14641 - gmx:100786073 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01057 19 38504144 38512394 Gma16g00394 16 4154860 4159686 GST