Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00392 ATGAGCAAGGATTATCTAATCATACTTTCTCTCCTTCTTTCCACGGTGCTTGCAACTGCAAGTTCTTCTTCTTCTTCTTCCTCCCTCTATCTTGGGAAGGGCTTCTCCCATCGCAAATTGTCTCCCAGTTATCACATTCACAAAACCATTGACGAATCCTATGCAGTTATCTTCGATGCTGGTAGCACGGGAAGCCGTGTACATGTCTATCGTTTTAACCAACAATTAGATCTCCTTCGCATTGGCCAAGACCTTGAGTTGTTTGTCAAGACTATGCCAGGTTTAAGTGCTTACGCTGAGAATCCACAAGATGCTGCAGAATCTCTTATTCCACTTTTGGAGGAAGCAGAAGCTGCTGTTCCTCAGGAGTTTCACCCCAGGACGCCAGTTAAACTTGGAGCAACTGCAGGTTTAAGGCAATTGGAAGGGGATGCTTCTGATAGGATATTGCAGGCGGTCAGTGACATGCTCAAGAACAGAAGCACACTGAACGTTGGGGCCGATGCAGTTTCAGTGTTGAGTGGAAACCAAGAAGGAGCTTATCAATGGGTAACAATTAACTATCTACTGGGAAACTTGGGAAAGCATTATTCAGAAACTGTTGCAGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCTTATGCAGTCTCAGAGACAGATGCTGCGAAGGCTCCACGAGCACCGGACGGAGTGGAATCATACATAACGGAGATGTTCCTTAGGGGAAAgaaatattacctctatgtacacagttacttgcgatacggtatgctagcagctcgtgcagaggctttaaaggttcgtgattctgaaaatccttgtattttggctggctttgatgggtattacgtatatggaggagtgcagtataaggccaaagctcccccttctggctcaagcttcagccaatgccaaaatgttgttgttgaagcactccatgttaatgcaacatgctcttacaaggattgcactttcggagggatatggaatggtggtgggggagctggagaaaacaacttttttattgcctcatttttctttgaagttgccgatgagGCTGGTTTTGTTGATCCAAACGCCCCCAATGCCAAAGTTCGTCCTGTGGATTTTGAGAATGCAGCAAAGGTTGCCTGTAACACAGAATTAAAGGATCTCAAATCCATTTTCCCTCGTGTTAAGGATGGAGACGTTCCTTATATATGCTTAGATCTTGTATACGAATATACATTGCTCGTTGATGGATTTGGCATAGATCCGCAGCAAGAGATTACGTTGGTGAGGCAAGTTGAGTATCAAGATTCTCTCGTGGAAGCAGCATGGCCACTAGGCAGTGCCATAGAAGCCATATCATCATTACCTAAATTTGAGAAATTAATGTATTTCATTTAA 1392 0.3376 MSKDYLIILSLLLSTVLATASSSSSSSSLYLGKGFSHRKLSPSYHIHKTIDESYAVIFDAGSTGSRVHVYRFNQQLDLLRIGQDLELFVKTMPGLSAYAENPQDAAESLIPLLEEAEAAVPQEFHPRTPVKLGATAGLRQLEGDASDRILQAVSDMLKNRSTLNVGADAVSVLSGNQEGAYQWVTINYLLGNLGKHYSETVAVVDLGGGSVQMAYAVSETDAAKAPRAPDGVESYITEMFLRGKKYYLYVHSYLRYGMLAARAEALKVRDSENPCILAGFDGYYVYGGVQYKAKAPPSGSSFSQCQNVVVEALHVNATCSYKDCTFGGIWNGGGGAGENNFFIASFFFEVADEAGFVDPNAPNAKVRPVDFENAAKVACNTELKDLKSIFPRVKDGDVPYICLDLVYEYTLLVDGFGIDPQQEITLVRQVEYQDSLVEAAWPLGSAIEAISSLPKFEKLMYFI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00392 463 Pfam GDA1/CD39 (nucleoside phosphatase) family 50 455 IPR000407 GO:0016787
Gma16g00392 463 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 173 188 IPR000407 GO:0016787
Gma16g00392 463 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 452 IPR000407 GO:0016787
Gma16g00392 463 CDD NBD_sugar-kinase_HSP70_actin 56 215 - -
Gma16g00392 463 Gene3D - 54 447 - -
Gma16g00392 463 PANTHER APYRASE-LIKE PROTEIN 2 452 - -
Gma16g00392 463 Gene3D Exopolyphosphatase. Domain 2 174 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00392 Gma-Chr16 4134339 4141081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00392 52 452 Calmodulin-binding Proteins AT3G04080 62.779 1.54e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00392 K14641 - gmx:100787491 865.914