Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00391 ATGAATTTTCTAACCTTCGTTACTGTTCTACTCTTCATACTACCAGCAACCTCATCTTCCCAGTATTTGGGGAACAACCTTCTCACTCATCGCAAGATATTCCTAAAAAAAGACAACATTATTACCTCGTACGCTGTCATCTTTGACGGTGGTAGCACAGGAACCCGTGTGCATGTCTTCCATTTTGACCAGAATTTGGATCTCCTTCCCATTGGTGATAGTCTTGAGCTTAATAAAAAGGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAATCTCTTATCCCACTTTTAGAGGAAGCTGAAAGTGTTGTCCCTGAGGACCTGTACCCTACTACACCCGTTAAGCTTGGGGCGACTGCAGGTTTAAGGCTTTTGGAAGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGGGATTTGCTCAAGAACAGAAGTACCCTGAACACTCAACCAGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAATTAATTATTTATTGGGGAAGTTGGGAAAAAGGTTTTCAAAGACAGTAGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCATCTCAAGGAACACAGCAAAAAATGCTCCAAAACCACCAGATGGAGAGGAACCTTACATAAAGAAGCTTGTACTCAAGGGAAAGGAATATGACCTCTATGTTCACAGTTATTTGCATTACGGTAGAGAAGCATCTCGTGCCGAGATTTTGAAGGTCACTGATGGCTCCGCTAACCCTTGTATTTTAGCTGGCTTCGATGGGACCTACACATATTCAGGAGCAGACTATAAGGCCTTCGCTCCCATTTCTGGCTCCAGTTACGATGAATGTAGAGAGGTTGTTCTTCAAGCTCTCAAATTGAATGAGTCATGCCCCCATCAAAATTGCACATTTGGTGGTATATGGGATGGTGGAAGGGGAAGTGGACAGAAAATTCTTTTCGGCACTTCATCTTTCTATTATCTGCCTACAGAGATTGGTATCATTGATCTAAATAAACCCAACTCCAAAATTCATCCTGTTGATCTTGAGATTGAAGCTAAACGAGCTTGTGAAACAAAATTGGAGGATGCCAAGTCCACCTATCCAAACCTTGCTGAGGATAGACTTCCATATGTATGCTTGGATATTGCATACCAGTATGCATTGTACACCGATGGATTTGGCCTTGATCCATGGCAAGAGATTACAGTGGCAAATGAAATAGAATATCAGGATGCTCTTGTGGAAGCTGCATGGCCTTTAGGCACTGCCATAGAAGCCATATCGTCATTGCCTAAATTTGATCGATTAATGTTTTTTATTTGA 1365 0.4227 MNFLTFVTVLLFILPATSSSQYLGNNLLTHRKIFLKKDNIITSYAVIFDGGSTGTRVHVFHFDQNLDLLPIGDSLELNKKVTPGLSAYADNPQQAAESLIPLLEEAESVVPEDLYPTTPVKLGATAGLRLLEGDASERILQAVRDLLKNRSTLNTQPDAVAIIDGTQEGSYLWVTINYLLGKLGKRFSKTVGVVDLGGGSVQMAYAISRNTAKNAPKPPDGEEPYIKKLVLKGKEYDLYVHSYLHYGREASRAEILKVTDGSANPCILAGFDGTYTYSGADYKAFAPISGSSYDECREVVLQALKLNESCPHQNCTFGGIWDGGRGSGQKILFGTSSFYYLPTEIGIIDLNKPNSKIHPVDLEIEAKRACETKLEDAKSTYPNLAEDRLPYVCLDIAYQYALYTDGFGLDPWQEITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDRLMFFI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00391 454 Pfam GDA1/CD39 (nucleoside phosphatase) family 42 445 IPR000407 GO:0016787
Gma16g00391 454 CDD NBD_sugar-kinase_HSP70_actin 46 205 - -
Gma16g00391 454 Gene3D - 44 438 - -
Gma16g00391 454 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 454 IPR000407 GO:0016787
Gma16g00391 454 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
Gma16g00391 454 Gene3D Exopolyphosphatase. Domain 2 164 422 - -
Gma16g00391 454 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00391 Gma-Chr16 4098624 4126368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00391 43 443 Calmodulin-binding Proteins AT3G04080 58.706 4.15e-165 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00391 K14641 - gmx:100781628 843.188