Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00304 ATGAAACATTTGGATGCAAGCAATTGCACTTCATTGGAAACTTCCAAATTCAATCCATCCAAGCCATGCAGTCTCTTTGCATCATCACCTTCAAATTTTCATTTTTCGAGAGAATTGATACGCTATCTTGAGGAACTCCCTCTTCCCAGAACAAGATTTGAGATGTTAATCCCAGGGAGTGAAATTCCATCATGGTTTGTCCCTCAAAAATGTGTTTCATTAGCTAAAATACCAGTCCCTCATAATTGCCCTGTAAATGAATGGGTGGGATTTGCTCTGTGCTTCCTATTAGTAAGTTATGCAAATCCTCCTGAGGCGTGCCATCATGAAGTTGAGTGCTACTTGTTTGGACCTAATGGTGTTGTCGGCAGTGAAATTGAATTTGTATTGAAAAGTTATGGTTGCCAATCATTGGAAATAGTGAGGTGCGGATGTCGTTTGGTATGTAAGCAAGATGTTGAAGATATTTATGAAAATAGTATCATTTCTTCTAGTGAAGAGATCGGAGTGGCCAGTGAGAAGcttctggaaaagctgaagtctatcgatttgagtttttcaaagaacctaaagcagtccccggactttgacggggctccaaatcttgaatcattggttcttgaaggatgcacaagtttaactgaggttcatccatcccttgtacgtcataagaaacctgttatgatgaatttggaagactgcaaaaggctcaaaactcttccaagTAAAATGGAGATGAGTTCCTTGAAATATTTAAGTCTTTCTGGTTGCTCTGAATTTGAATATCTTCCGGAGTTTGGGGAAAGCATGGAGCAAATGTCAGTGCTTAATTTAGAGGAAACTCCAATAACAAAACTACCCTCATCACTGGGATGCCTAGTTGGCCTTGCTCATTTGGATTGA 903 0.3056 MKHLDASNCTSLETSKFNPSKPCSLFASSPSNFHFSRELIRYLEELPLPRTRFEMLIPGSEIPSWFVPQKCVSLAKIPVPHNCPVNEWVGFALCFLLVSYANPPEACHHEVECYLFGPNGVVGSEIEFVLKSYGCQSLEIVRCGCRLVCKQDVEDIYENSIISSSEEIGVASEKLLEKLKSIDLSFSKNLKQSPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDCKRLKTLPSKMEMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLVGLAHLD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00304 300 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 173 290 - -
Gma16g00304 300 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 173 290 IPR044974 GO:0006952
Gma16g00304 300 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 9 96 - -
Gma16g00304 300 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 96 IPR044974 GO:0006952
Gma16g00304 300 SUPERFAMILY L domain-like 173 300 - -
Gma16g00304 300 Pfam C-JID domain 57 154 IPR045344 -
Gma16g00304 300 Gene3D Ribonuclease Inhibitor 133 300 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00304 Gma-Chr16 3203808 3205349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00304 176 300 WRKY Transcription Factor Family AT4G12020 40.800 1.32e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00304 - - gmx:100815486 341.658