Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00301 ATGAAAGTTGAAGTAGAAATCATTTCTAGAGAAGACATTAGGCCTTCTTCTCCCACACCCTCTCACCTGAGAGTCTTCAATCTTTCCCTTTTGGATCACCTCATTCCATCACCATATGCTCCCATAATCCTATACTACACCTCACCCAACAGTGACAAAACTTACCTCTCTGAAGTCCCCAAGAGGTTAGAATTGCTGAAAAAATCTTTATCGGAGACACTAACCCAATTCTATCCTCTTGGTGGCAAAATCAAAGAATTAGACTTTTCCATTGAGTGCAATGATGAAGGTGCCAATTTTGTGCAAGCCAAAGTGAAGTGTCCTCTTGATAAATTTCTAGTCCAACCTCAGTTGACCTTACTTCACAAGTTTCTTCCCACTGATCTTGTTTCTGAAGGATCAAATTCAGGAACCTATGTGACTAACATTCAGGTAAACATCTTTGAATGTGGAGGAATTGCCATTGGCTTGTGCATTTCTCATAGAATCCTAGATGGGGCTGCACTAAGCACCTTTATAAAAGGGTGGTCAGAAAGAGCCAAGGGTTTTAATTGTGACCAATTAACCAAACCAAACTTTATAGGATCTGCTCTCTTCCCCACAAACAACAATCCATGGCTTAGAGACTTATCAATGCGCATGTGGGGTTCTTTTTTCAAACAAGGCAAGTGGGTAACAAAGAGGTTTCTCTTTAGAAACTCAGATATAGCCAAACTCAAGGCTCAAACATTAGGGACAGCAAATTCCACACGTTTGGAGATAGTTTCTTCAATGTTGTGGAAGTCCCTCATGGGTGTGTCTAAAGTACGGTTTGGCACACAAAGGCCTTCTTTGGTGACTCATTTGGTGAACCTTAGGAGGAGAATGGATGAGGCTCTTTGTCCTCAACATGCAATGGGAAATCTTCTTTGGTTGGTGGCTGCGGAGAAAATGTGTGATGATCATGATGAGATGGGGTTGGAGGACTTGGTGGGGAAGTTGAGGAAATCAATATCACAAGTTGATGAAAAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCAATTATGAAGGAGAGTCTTGGGGCAATAAGTGAGAAGGGATCAAAGGGTGAAGTAGTGGATTATGTTGGGTTTAGTAGTTGGTGCAATTTTGGGTATTATGAGGCTGATTTTGGGTGGGGAAAGCCCACTTGGGTGAGTGGTGTTGGTTCAATTGGTTCAGTTTCAATGTTTATGAATCTCATCATCCTAGTGGATACAAGGCTGGGAGATGGCATAGAAGCTTGGGTTACCTTGGATGAGGAGGACATGACTCATTTGGAAGCAAATACTGAACTCCTCACTTGTGCAACACTTGATCCAAGTCCTTTAGCAATGAGTTGA 1368 0.4189 MKVEVEIISREDIRPSSPTPSHLRVFNLSLLDHLIPSPYAPIILYYTSPNSDKTYLSEVPKRLELLKKSLSETLTQFYPLGGKIKELDFSIECNDEGANFVQAKVKCPLDKFLVQPQLTLLHKFLPTDLVSEGSNSGTYVTNIQVNIFECGGIAIGLCISHRILDGAALSTFIKGWSERAKGFNCDQLTKPNFIGSALFPTNNNPWLRDLSMRMWGSFFKQGKWVTKRFLFRNSDIAKLKAQTLGTANSTRLEIVSSMLWKSLMGVSKVRFGTQRPSLVTHLVNLRRRMDEALCPQHAMGNLLWLVAAEKMCDDHDEMGLEDLVGKLRKSISQVDEKFVEELRGDKGRSIMKESLGAISEKGSKGEVVDYVGFSSWCNFGYYEADFGWGKPTWVSGVGSIGSVSMFMNLIILVDTRLGDGIEAWVTLDEEDMTHLEANTELLTCATLDPSPLAMS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00301 455 Gene3D - 222 445 IPR023213 -
Gma16g00301 455 PANTHER VINORINE SYNTHASE-LIKE 5 454 - -
Gma16g00301 455 Pfam Transferase family 4 441 - -
Gma16g00301 455 Gene3D - 1 206 IPR023213 -
Gma16g00301 455 PANTHER F21J9.9 5 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00301 Gma-Chr16 3187487 3188961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00301 3 436 Monolignol Biosynthesis Gene Families AT5G48930 25.275 5.23e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00301 - - gmx:100305374 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00618 07 6351573 6351943 Gma16g00301 16 3187487 3188961 GST