Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00286 ATGGATGCTGTGTCGTCCGCACTAATAGAGCCGGTAACTAATTCTGTGTTGGATCTGGTTAAAAAGCATGTGGATTACATCCGTTACAGGCAAAACGTTGGTGAACTAGACGAGCGTGTTGAACAGCTTGAACATGAAAAAGCAAGGGTAGATCATCAATGTAATAGAGCTGTCAAAAATGGACACAACATTGAAGTTAAGGCTAGAGAATGGTCACGGCAAGTGGGTGAATTCAAGACAGAAGTGGAGAACTATAAGAATGATGAAGGCCACAGAAAGGCAGGGTTAACCAATTGTTTATTTCCTTACTTTAGGTATAGACTAGGCAGACTAGCAAAGAAGAAGGCAGTTGAGGGTAAAAAGCTAATCGATGGTTGCCCCAAGCCTGATGAAATTGCTTTTCGGGGAAACGTAACATTTAATGATGCCATTTTGTCTAATACTGATCTTATGGAATTTGATTCTAGAAAATCCATAATGGAAGACATAATGGAAAAACTTGAAGATCCCACTGTGAAAATGATTGGAGTGCATGGCCCAGGTGGGGTGGGTAAGAGCACTTTAATCAAAGCAATTGCTGGCAGTGCTCAAGTCAAGAAACTGTTTAATGTGGTGGCTTTTTCAGAAATAACAGCCAATCCCAATGTAAAAAAAATCCAGGAAGATATTGCTTACGTGTTAGGATTGACATTGGAAGGGGAAGGTGAGAATGTGAGAGCTGATTCTCTAAGGAGGAGGCTAAAGCAAGAGAAGGACAATACCCTTATAATCTTGGATGACCTTTGGGACAGATTAGACTTGAATAAGTTAGGCATTCCACTTGATGATGACATGAATGGTCTAAAAATGAAGGGGGCTAGAATACCAGATGAAATGTCCCGCACTAGTAAAGAAAAATCTCTTGATGATTATAAGGGGTGCAAAATTCTGCTAACTTCAAGGGATACAACTGTATTGTCTGAGAAGATGGCTGTTAAGTCAATTTTCGGGGTAAAGGAATTAGAAGAAGCGGAAGCTATGAGGTTGTTAAAGAAGGTGACTGGAATACCTGATCAAATGTCCCACTCTAAACAAGAAATTGTTAGGAAGTACTGTGCAGGGATACCCATGGCTATTGTTACAGTTGGAAGGGCATTAAGAAACAAGAGCGAGTCAGTGTGGGAAGCTACGCTAGATAAACTCAAAAGGCAAGAACTGGTGGGAGCACAATACTCTATGGAGATTTCAGTAAAAATGAGTTACGACCATCTAGAAAATGAGGAGCTCAAGTCCATTTTCTTACTTTGTGCTCAAATGGGTCATCAACCCCTAATTATGGACTTGGTGAAGTATTGCTTTGGTTTGGGTATACTTGAAGGGGTCTACTCGCTTAGGGAAGCTCGGGACAAAATAAATATATGGATTCAAAAGCTTAAACACTCGGGTTTGGTGATGTTGGACGAAAGTTCCAGCATTCATTTCAATATGCATGACATGGTTCGAGATGCTGCTTTATCTATAGCACACAAGGAGAAAAATGTTTTTACTTTGAGAAATGGCAAACTTGATGATTGGCCTGAACTCGAGAGGTGCACTTCTATTTCTATATGCAACAGTGATATCATTGATGAGCTTCCTAATGTTATAAATTGTCCTCAACTTAAATTTTTCCAAATTAACAGCGATGATCCATCTGTAAAAATACCTGAGAGTTTTTTTAATGAAATGAAAAAACTCAGAGTATTAATATTGACTGGTATTCATCTAGAAAGCTTACCACCTTCAATCCAATGCCTATCAAACCTCAGATTACTTTGTTTGGAGCGATGCATTTTAGATGGCAACTTATCCTTCATAGGAGAGCTGAAAAAATTAAGAATTCTCAGTTTTTCTGGATCTCAACTTAAAAAATTGCCAGCTGAGTTATGTTGCTTAGATAAGTTGCAACTACTTGACATCAGCAATTGTTCCCTAGTGGAGATGATTCCACGTAATCTTATATCGAGGCTAATTTCTTTAGAAGAGTTGTATATCAGAAAGAGCTTGATCAAAAAATTGACTGGAGGAGAGACAAACCGAAGTCGATTTTCATTTCTTCCTGAGCTAAAGCATTTGCATCAATTGAAAGTGGTGGACTTATGCATCCCATGTGCTGAAGTTTTGCCGAAGGACTTGTTCTTTGACAAGTTAAATGATTACAAGATCGTGATTGGAGGCTTTGAGACGCTTTTAGTTGGAGATTTCAGGATGCCTAATAAGTACGAAGCATTCAGATCTTTGGCGTTGCAGCTGAAGGACAGAACTGACAATATTCATTCCCAGACCGGGATGAAATTATTGTTTAAAGGAGTTGAAAATTTGTTGTTGGGAGAGCTAAGTGGTGTTCAAAATGTTATTGATGAGTTGAATTTGGATGGATTTCCCTGTCTGAAACACTTATCTATCACAAATAATGATGGCATCAAATATATCAACTCAATGGATTTGTCTCATTCTCGAGATGTTTTTCCCAATTTGGAATCTCTATGTCTCAACAAACTGACGAACATAGAAATGATATGTCGCAGTCCAGTTACAGTTGACTCATTTGCCAAATTAAAAACCATCAAGGTCATGGGGTGTACCTGTTTGAAGAATCTCTTCTCCTTTTACAAGGATAAATTTGTTTCTAGTCTTGAAACAATTGATGTTTCTGATTGTGATTCTTTAAAGGAGATCTTTGAAATACTAGTAAATCCTGACAAGGTTGAGTTTCTTAAGTTGCACTCTTTGACACTGCAGTCGTTGCCATTATTTACTAGTTTTTATAATTACAGAGTAGAGGGACCTTCTGAATCTCAACTGACAAAAGCTCAAACAGTAGAGAGGGATGAGAAAGAAATTACTATTGCACAAGATGAACGTAGTGGCATGGCTCCCCCTCTCTTTGGTGAACTGGTTGAAATTCCAAACTTAGAGAGCTTGAATTTATCCTCAGTCAGTATCCATAAGATATGGAGTGACCAACCACTGTCAAGTTTCTGCTTTCATAGCTTAGTAAAATTAGTTGTGAAAGGTTGTGATAATTTGAGATATTTATGTTCATTGTCTGTGGCTAGTGGTTTGAAGAAACTGAAAGGACTCTTCGTAAGTGAGTGTCCGTTGATGGAGAAGATTTTTGAGACTGAAGGAAATAGTGCAGACAAAAAGGTCTGCGTCTTTCCTAAGTTGGAAGAAATCCACCTCAGTAAAATGAATATGTTAACAGACATATGGCATGCTGAAGTGATGAGTGCAGATTCCTTTTCTAGTCTCATTTCTGTGCACATATATGGGTGCAAAAAAATAGATAAGATTTTTCCGAGTCACATGGAAGGATGGTTTGCAAGTTTGAACAGCTTGAAGGTTTATGATTGTGAGTCAGTAGAAGTGATTTTTGAAATCAAAGATTCTCAGCAAGTAGATGTATCTTCTGCGATAGACACAAATTTGCAGCTTATTGAAGTATGGAGTCTCCCAAACTTGAAGCTAGTGTGGAGCACAGATCCAGGAGGAATTCTTAACTTCAAAAGACTGCGGAGTATACAGGTTGATGACTGTGATAAACTGAGGAATGTCTTTCCAGCATCTGTGGCCAAAGATGTTCGAAAGCTTGAATCCATGTCGGTGATGAGCTGTGAGGGAATGCTAGAGATCGTTGAAGATGAATCAGAAACAAACAATGAAACATTAATGTTTCCTGAACTAACCAACATGAAATTATATAGCCTATCAAACCTCAAGCGTTTCTACAAGGGGAAGCATTTTATAGAATGTCCAAGATTGAAGAAGTTGACAATGGGCCGTTGTGAGAAGCTTAAAACATTCCCAATAGAAACCAGTGAAACCACAAACGAAGAAGTAAAACCAGTTTTCTCAGCTGAAAAGGTAATCCCCAACTTGGAGTATATGGATATTTGCTTTGACGAAGCGCAGAATTGGTTATCAACCAACACCATGAAGTACCGAATGCACTCTTTAAAAGAGCTTTGGGTGAGATCAGTAAAAAGTGGTGAACTTCTCCGTCTGATTCTGTACAGAATGCCAAATCTAGAAAAGTTACTATTGGATGACTTTGACTCTCAACATTTGCTTAAATTGACATCAGTGCCATGTTTGGGAACCGTATTACAACTGAAGGAATTGGTTTTGCAGGATTCAAAGATAAAGGATTTAGGATTTGAACGAGAGCCAGTTCTACAGAGACTAGAGCTTTTGAgcttacatgtgtgccgcaaattgagcaatttggctcctccctcggtatcattggcttacttgacaaatttggaagtaagtctttgtcgtggattaaattttttaatggcatcctcgacggcccgaagcttggttcaacttaagagcatgagggttatttattgtgataatgtaaaggaaatagtaaccattgatgaaaataaagaaggcagagtgatggaaattgaattcagcaaattgattactatagaacttcaagagctcagaaacctcacaagtttttgcagttacaagaactgtgaatttaaattcccgtcattggaaatgttgattgtggatggatgccccatgaTGGAAACATTCACCGAGAATCGCACAACAGCTCCAAAGTTACAAAATATATTTGCTTTTGAAGGAGAAAAGGAATCGAGATGGGAGTGGGAAGGTGACTTGAATGCCACCATACAAAAAGATTTTAAAAATAAGatttcaaagtctgcacgccaggtatcagatcttagactcagaaataatccactgcaaaagatatggcaaggctcactaccaatcccagatttgtgcttcagtaaattgcactccttgattgtggacggctgccaatttttatcagatgcagtactacctttcaatttacttcgtttgttaactgaattggaaacattggaagttcgagactgcgattctgtgaaaaccatatttgatgtgaaatgtacaagacaagacagaataatgacaactatggaaccaaccatcttccccctcccttttcctctcaagaaattggttttacagcggctgccaaatctggagaacgtttggaatGACGACCCTCATAGAATTCTCAGGATGCAACTTCTACAGCAAGTACATGTTGAGAAATGTGAAAACCTTACTAGTGTGTTTCCTGCAACAGTAGCCAAAGATATTGTGAAACTTGAAAATCTAGTTGTGCaacactgtgagggattgatggctattgttgcagaggataatgcagatcccaacggaacaaatcttgagcttacattcctctgcctgacgtcactcacgatatgtgatttgccagagttaaagtgttttttgcagtgtgacatgttgaagacattttcacatgtagaaccaaatactaaaaatcaaatctgtattgaaaagcttacacccaatttgcagcacctgacactcggtgaaaatgaactgaagatgattccgcatggagaatttccaggaaacgtcttgcacaatttaaaagctcttattttgctgaacttcagcgttgagtcctatgaatttgcatatggatttctacaacaggtgcccaatattgagaagcttgaggtgtattgtagttccttcaaggagattttctgctttcaaagtcctaatgtggatgatactggactcctatcacagctgaaagtattaagcttggagtccctttcagagcttgaaaccataggttttgagaacactttgattgagccttttctcagaaatctagaaaccttggatgtaagcagttgttcagttttaagaaacttggcaccatcccccatatgtttccccaatctgatgtgtttgtttgtatttgagtgccatgggttggaaaacttgttcacatcctcaacagccaaaagtttgtctcggctcaaaataatggaaataagaagctgtgaatcaattaaagagatagtgtctaaggagggggatggatcaaatgaagacgagataatatttcggcagcttctttatttgaatcttgaatctttaccaaatctcacaagcttttatacagggagattgagtttcccatccttgctgcaattgtcagtaatcaattgccactgtttggaaactttatctgctggtaccatagatgcagataagttgtatggagttaagtttcagaagaaatcagaagctatcccattggatattgatctcaattctaccattcggaatgcatttcaggcaacgtctgcacgaagtgaatcatatcttcggctcagaaatagcccagtacaaaagatatggcatggctcactgtccatcccagactcgtgcttcagtaacttgggcaccttgattgttgacggctgccaatttttatcagatgcagtgctacccttcaatttacttcctttattacctaaattgaaaaatttgaaagttcaaaactgtgaatatgtgaaaaccatatttgatgtgaaatatataacccaagacagaaaaatgacaactatgggagcaaccagcatccccctcccttttccccttaagaaattgactttatcggagctgccaaatctggagaatgtttggaatGAACATCCTCATAGAATTCCAAGGATGCAACTTTTACAAGAActtacacccaacttacaacatctaacactcggtcaaaacgaactcaagatgattttgcatggagaaattcaggggaaccatttaaacaagttaaaagttctaactctgtgctttcatgttgagtccgatgtatttccacatggatttctacaactggtgcctaatatagaggagcttgtggtgtgtgatggatccttcaaggagattttctgccttcaaagtcctaatgtggatgatactactctcctatcacaactgaaagtgttacgcttggagtcccttccagagctcgtttccattgggtcactaaatttggtaccatgcacaatgtctttctccaatctgacaaagttggaagtaaaaagttgcaatagcctgctatgtttgttcacatcctcaacagccaaaaatttagctcaactccaaataatgaagatagaattttgtgaatcaattaaagagatagtgtctaaggagggggatgaatcacatgaggatgagataatatttccgcggctcaagtgtttggaacttaaagacttaccagatctcagaagcttctacaaagggagtttaagtttcccatctttggagcaattgtcagtaatcgaatgccacgggatggaaactttatgtccgggtaccctaaaagcagacaagttgctaggagttgtattaaagaggtatgtgtacatgccattggaaattgatctcaagtctaccatacggaaggcatttctagcagagatttcaaagtctgcacgccagaaccaaatactaaaaatcaaatctgtattgaaaagcttacacccaatttgcagcacctga 7428 0.234 MDAVSSALIEPVTNSVLDLVKKHVDYIRYRQNVGELDERVEQLEHEKARVDHQCNRAVKNGHNIEVKAREWSRQVGEFKTEVENYKNDEGHRKAGLTNCLFPYFRYRLGRLAKKKAVEGKKLIDGCPKPDEIAFRGNVTFNDAILSNTDLMEFDSRKSIMEDIMEKLEDPTVKMIGVHGPGGVGKSTLIKAIAGSAQVKKLFNVVAFSEITANPNVKKIQEDIAYVLGLTLEGEGENVRADSLRRRLKQEKDNTLIILDDLWDRLDLNKLGIPLDDDMNGLKMKGARIPDEMSRTSKEKSLDDYKGCKILLTSRDTTVLSEKMAVKSIFGVKELEEAEAMRLLKKVTGIPDQMSHSKQEIVRKYCAGIPMAIVTVGRALRNKSESVWEATLDKLKRQELVGAQYSMEISVKMSYDHLENEELKSIFLLCAQMGHQPLIMDLVKYCFGLGILEGVYSLREARDKINIWIQKLKHSGLVMLDESSSIHFNMHDMVRDAALSIAHKEKNVFTLRNGKLDDWPELERCTSISICNSDIIDELPNVINCPQLKFFQINSDDPSVKIPESFFNEMKKLRVLILTGIHLESLPPSIQCLSNLRLLCLERCILDGNLSFIGELKKLRILSFSGSQLKKLPAELCCLDKLQLLDISNCSLVEMIPRNLISRLISLEELYIRKSLIKKLTGGETNRSRFSFLPELKHLHQLKVVDLCIPCAEVLPKDLFFDKLNDYKIVIGGFETLLVGDFRMPNKYEAFRSLALQLKDRTDNIHSQTGMKLLFKGVENLLLGELSGVQNVIDELNLDGFPCLKHLSITNNDGIKYINSMDLSHSRDVFPNLESLCLNKLTNIEMICRSPVTVDSFAKLKTIKVMGCTCLKNLFSFYKDKFVSSLETIDVSDCDSLKEIFEILVNPDKVEFLKLHSLTLQSLPLFTSFYNYRVEGPSESQLTKAQTVERDEKEITIAQDERSGMAPPLFGELVEIPNLESLNLSSVSIHKIWSDQPLSSFCFHSLVKLVVKGCDNLRYLCSLSVASGLKKLKGLFVSECPLMEKIFETEGNSADKKVCVFPKLEEIHLSKMNMLTDIWHAEVMSADSFSSLISVHIYGCKKIDKIFPSHMEGWFASLNSLKVYDCESVEVIFEIKDSQQVDVSSAIDTNLQLIEVWSLPNLKLVWSTDPGGILNFKRLRSIQVDDCDKLRNVFPASVAKDVRKLESMSVMSCEGMLEIVEDESETNNETLMFPELTNMKLYSLSNLKRFYKGKHFIECPRLKKLTMGRCEKLKTFPIETSETTNEEVKPVFSAEKVIPNLEYMDICFDEAQNWLSTNTMKYRMHSLKELWVRSVKSGELLRLILYRMPNLEKLLLDDFDSQHLLKLTSVPCLGTVLQLKELVLQDSKIKDLGFEREPVLQRLELLSLHVCRKLSNLAPPSVSLAYLTNLEVSLCRGLNFLMASSTARSLVQLKSMRVIYCDNVKEIVTIDENKEGRVMEIEFSKLITIELQELRNLTSFCSYKNCEFKFPSLEMLIVDGCPMMETFTENRTTAPKLQNIFAFEGEKESRWEWEGDLNATIQKDFKNKISKSARQVSDLRLRNNPLQKIWQGSLPIPDLCFSKLHSLIVDGCQFLSDAVLPFNLLRLLTELETLEVRDCDSVKTIFDVKCTRQDRIMTTMEPTIFPLPFPLKKLVLQRLPNLENVWNDDPHRILRMQLLQQVHVEKCENLTSVFPATVAKDIVKLENLVVQHCEGLMAIVAEDNADPNGTNLELTFLCLTSLTICDLPELKCFLQCDMLKTFSHVEPNTKNQICIEKLTPNLQHLTLGENELKMIPHGEFPGNVLHNLKALILLNFSVESYEFAYGFLQQVPNIEKLEVYCSSFKEIFCFQSPNVDDTGLLSQLKVLSLESLSELETIGFENTLIEPFLRNLETLDVSSCSVLRNLAPSPICFPNLMCLFVFECHGLENLFTSSTAKSLSRLKIMEIRSCESIKEIVSKEGDGSNEDEIIFRQLLYLNLESLPNLTSFYTGRLSFPSLLQLSVINCHCLETLSAGTIDADKLYGVKFQKKSEAIPLDIDLNSTIRNAFQATSARSESYLRLRNSPVQKIWHGSLSIPDSCFSNLGTLIVDGCQFLSDAVLPFNLLPLLPKLKNLKVQNCEYVKTIFDVKYITQDRKMTTMGATSIPLPFPLKKLTLSELPNLENVWNEHPHRIPRMQLLQELTPNLQHLTLGQNELKMILHGEIQGNHLNKLKVLTLCFHVESDVFPHGFLQLVPNIEELVVCDGSFKEIFCLQSPNVDDTTLLSQLKVLRLESLPELVSIGSLNLVPCTMSFSNLTKLEVKSCNSLLCLFTSSTAKNLAQLQIMKIEFCESIKEIVSKEGDESHEDEIIFPRLKCLELKDLPDLRSFYKGSLSFPSLEQLSVIECHGMETLCPGTLKADKLLGVVLKRYVYMPLEIDLKSTIRKAFLAEISKSARQNQILKIKSVLKSLHPICST 2475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00286 2475 SUPERFAMILY L domain-like 1662 2032 - -
Gma16g00286 2475 PANTHER - 1911 2057 - -
Gma16g00286 2475 SMART AAA_5 171 339 IPR003593 -
Gma16g00286 2475 PRINTS Disease resistance protein signature 248 262 - -
Gma16g00286 2475 PRINTS Disease resistance protein signature 880 896 - -
Gma16g00286 2475 PRINTS Disease resistance protein signature 174 189 - -
Gma16g00286 2475 PRINTS Disease resistance protein signature 365 379 - -
Gma16g00286 2475 SUPERFAMILY L domain-like 489 931 - -
Gma16g00286 2475 PANTHER RPP4C3 1175 1275 - -
Gma16g00286 2475 PANTHER RPP4C3 1059 1143 - -
Gma16g00286 2475 Pfam NB-ARC domain 158 283 IPR002182 GO:0043531
Gma16g00286 2475 Pfam NB-ARC domain 303 409 IPR002182 GO:0043531
Gma16g00286 2475 SUPERFAMILY L domain-like 2093 2414 - -
Gma16g00286 2475 SUPERFAMILY RNI-like 973 1128 - -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 2056 2422 IPR032675 -
Gma16g00286 2475 Gene3D - 146 327 IPR027417 -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 1296 1545 IPR032675 -
Gma16g00286 2475 Gene3D - 333 418 IPR042197 -
Gma16g00286 2475 PANTHER - 2296 2427 - -
Gma16g00286 2475 SMART LRR_typ_2 615 638 IPR003591 -
Gma16g00286 2475 SMART LRR_typ_2 2202 2225 IPR003591 -
Gma16g00286 2475 SMART LRR_typ_2 1798 1821 IPR003591 -
Gma16g00286 2475 SMART LRR_typ_2 569 591 IPR003591 -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 1553 1722 IPR032675 -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 1110 1295 IPR032675 -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 911 1109 IPR032675 -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 1788 1982 IPR032675 -
Gma16g00286 2475 PANTHER - 1698 1920 - -
Gma16g00286 2475 PANTHER RPP4C3 1401 1559 - -
Gma16g00286 2475 PANTHER RPP4C3 1911 2057 - -
Gma16g00286 2475 PANTHER RPP4C3 27 1051 - -
Gma16g00286 2475 Coils Coil 68 88 - -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 682 910 IPR032675 -
Gma16g00286 2475 PANTHER RPP4C3 1698 1920 - -
Gma16g00286 2475 PANTHER RPP4C3 2296 2427 - -
Gma16g00286 2475 Coils Coil 26 60 - -
Gma16g00286 2475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 429 IPR027417 -
Gma16g00286 2475 PANTHER - 1401 1559 - -
Gma16g00286 2475 PANTHER - 1175 1275 - -
Gma16g00286 2475 PANTHER - 1059 1143 - -
Gma16g00286 2475 PANTHER - 27 1051 - -
Gma16g00286 2475 Gene3D Ribonuclease Inhibitor 486 681 IPR032675 -
Gma16g00286 2475 SUPERFAMILY L domain-like 1232 1540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00286 Gma-Chr16 2989916 3029445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00286 172 504 WRKY Transcription Factor Family AT5G45050 27.168 1.61e-09 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00286 - - gmx:100811732 3704.06