Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00277 ATGGCGGATGAATCGGAGCACACGGCGGCGCCGGCGAGCGGTGAATCGCTGCTTGACAAGATTGCCGAGAAGATTCACGGCCACCACGACTCTTCCTCTTCCTCCGATTCCGATTCGGAGAAAAAGGAAACTTCGTCAATTAAGGAAAAGGTTTTCCGCCTCTTTGGAAGGGAGAAGCCAGTTCACTCCGTCCTCGGcggtggaaaacCTGCTGATGTGCTCTTGTGGAGGAACAAGAAGATATCTGCTAGTGTACTTGGTGTAGCCACTGCTGTTTGGATCTTTTTTGAGTTGCTTGAATATCACCTGCTTACTCTAGTTTGTCACATTTCGATTCTGGTGCTTGCAGTTTTGTTTTTGTGGTCCAATGCCCATACCTTTATTCACAAGGCACCGCCTTGCATCCCAACCGTTCATCTCCCTGAAGAACCAATTCGCCAATTCGCATCTGCATTGACAATTGAAATCAACCGTGGATTTGCTGCCTTGCATGCTATTGGTTCTGGAAGAGATTTGAAGACATTTCTCATTATTATTGTTGGGACGTGGATTATATCAATTGTGGGGAGCTGGTGCAATTTCTTGACCTTGTTCTACATTGTCTTTGTTTTGTTGCATACGGTTCCTGTCATCTATGACAAGTATGAGGATAAGATAGACCCTCTGGCAGAGAAGGCACTCATCGAGTTCAAGAAGCAGTATGCTGTGTTTGACGAAAAGGTCTTGAATAAGATCCCGAAAGGCCCATTGAAAGGGAAGAAGTTAGCTTAG 771 0.4527 MADESEHTAAPASGESLLDKIAEKIHGHHDSSSSSDSDSEKKETSSIKEKVFRLFGREKPVHSVLGGGKPADVLLWRNKKISASVLGVATAVWIFFELLEYHLLTLVCHISILVLAVLFLWSNAHTFIHKAPPCIPTVHLPEEPIRQFASALTIEINRGFAALHAIGSGRDLKTFLIIIVGTWIISIVGSWCNFLTLFYIVFVLLHTVPVIYDKYEDKIDPLAEKALIEFKKQYAVFDEKVLNKIPKGPLKGKKLA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00277 256 ProSiteProfiles Reticulon domain profile. 70 256 IPR003388 -
Gma16g00277 256 PANTHER RETICULON 1 254 IPR045064 GO:0009617
Gma16g00277 256 PANTHER RETICULON-LIKE PROTEIN 1 254 - -
Gma16g00277 256 Pfam Reticulon 71 226 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00277 Gma-Chr16 2935797 2938562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00277 - - gmx:100796111 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00277 16 2935797 2938562 Gma10g02182 10 49406724 49412259 ECH
Gma16g00277 16 2935797 2938562 Gma16g00277 16 2935797 2938562 ECH
Gma07g00579 07 5613987 5617254 Gma16g00277 16 2935797 2938562 GST
Gma18g02241 18 56150751 56156846 Gma16g00277 16 2935797 2938562 PCT
Gma09g02285 09 48340374 48346040 Gma16g00277 16 2935797 2938562 PCT