Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00262 ATGGGAAACAGTGAGGAAGAGAAATCTGTTAAAACTGGAAGTCCTTCTTCTTCACCTGCAACAACTGAGCAGACCAACCAACCTAATATTCACGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGGCCGCCACAGCCTATGATGCAACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCGTAGAATCACCAACCAAATTCTCTGGAAATACTAATCAGGGTTTAGTGAAGAAATTGAAAGGGTTTGATGAGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGAGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGAAGCCGAGAAGGAACACCGATCACTGCAGATGCAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTGCATCTTCCAAAAAGATTGTGTCAGCTACCCCAGCTAGTGTTGCAGGAACATTAGTTGGACCTGTAGTTTCTTCAGGTATGGCCACAGCACTGGAGCTGAGGAACCCTTCGACTGTTCATTCTAAGGCAAATTCCACAAGTGCCGCACAACCTTGTGCAGTTGTGCGTAATGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAGAATGTGTCTCTGAAGTCAGAAATAACTCGACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACCAAGGGAAGAGATAACTTTGAGCAGCATTGACAGCAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAACAATTCCGGAGCTAATGATAGAACTGCAGAGAATGAGAATGATATCTGCGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTAATGCTGTAGCAGCTGGTTGA 1278 0.4617 MGNSEEEKSVKTGSPSSSPATTEQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMQPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVESPTKFSGNTNQGLVKKLKGFDELAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTAGANQTKRKRSREGTPITADAEGKTELQNGPASKETASSKKIVSATPASVAGTLVGPVVSSGMATALELRNPSTVHSKANSTSAAQPCAVVRNETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITRLTEGSEQMRMENSALREKLINTQLGPREEITLSSIDSKRAAPVSTENLLSRVNNSGANDRTAENENDICENKPNSGAKLHQLLDTNPRANAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00262 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Gma16g00262 425 MobiDBLite consensus disorder prediction 158 185 - -
Gma16g00262 425 MobiDBLite consensus disorder prediction 154 223 - -
Gma16g00262 425 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Gma16g00262 425 MobiDBLite consensus disorder prediction 101 130 - -
Gma16g00262 425 Coils Coil 307 327 - -
Gma16g00262 425 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Gma16g00262 425 PANTHER G-BOX-BINDING FACTOR 3 1 425 - -
Gma16g00262 425 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Gma16g00262 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 425 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma16g00262 425 MobiDBLite consensus disorder prediction 282 308 - -
Gma16g00262 425 Pfam Disordered region downstream of MFMR 131 259 - -
Gma16g00262 425 Gene3D - 283 337 - -
Gma16g00262 425 MobiDBLite consensus disorder prediction 108 130 - -
Gma16g00262 425 SUPERFAMILY Leucine zipper domain 283 338 IPR046347 GO:0003700|GO:0006355
Gma16g00262 425 MobiDBLite consensus disorder prediction 383 409 - -
Gma16g00262 425 MobiDBLite consensus disorder prediction 209 223 - -
Gma16g00262 425 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Gma16g00262 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Gma16g00262 425 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00262 Gma-Chr16 2786587 2789818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00262 1 425 bZIP Transcription Factor Family AT2G46270 48.148 1.58e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma16g00262 MFMR_assoc 4.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00262 K09060 - gmx:547789 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00262 16 2786587 2789818 Gma16g00262 16 2786587 2789818 ECH
Gma07g00562 07 5424935 5428247 Gma16g00262 16 2786587 2789818 GST