Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00236 ATGGAGGCCCTCAATGCTGCTGGCTTGACCCCTCTATCTGTGCTCTCTGATACAAAAACAACAAGAACTAAACACCCTTCTGTTTCTGTATGCAAAGTCTCAAACTTTTCCACCTCAACCAACAAAAAACAAACCTTGCTGCAAAGTTGCATATCAAAAACTTTGCATGGGGGGCTGATTCTTGCAGCTTCCGTTGTAAATGGTGGAGCTGCCACAGCTTTAACGTACGATGAAGCCCTGGGACAACCTTTGAGCCTCCCTGGTGCTGGGGACTTTGATGTGAACGGTTTTGTGGAGAGTGTCACTGGCTTTGCAGCTGAAAACCCTGCAATTCTTGCTGGGGGAGTAGCTGTTTTGGCAGTGCCATTGGTTTTGTCTCAGGTTCTTTTCAAGAAGCCTAAGGCTTGGGGTGTTGAGTCTGCCAAGAATGCTTATGCAAAACTTGGTGCTGATGGGAATGCTCAGTTGCTTGATATAAGGGCACTGGTGGAGATTAGGCAAGTGGGGTCCCCAGATGTTGGGGGTCTGAAGAAGAAAGCAGTGTCAATACCTTATAAGGGTGATGATAAGCCAGGGTTCTTGAAGAAGCTTGCTTTGAAGTTTAAGGAGCCAGAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACCGTTAATGGGTTTAAAGCAGCTTATGCGATTAAGGATGGTGCAGAAGGACCGCGAGGATGGAAGAGTAGTGGTCTTCCTTGGATAGAACCACGGAAAACATTGAGTTTTGACAATCTGACAGATGCTATATCTGAAGCAATAGGAGATACCACTGATGGCGTGGCAGTTACTCTTGGGGTTGCTGCAGCTGCTGCTGGACTTAGTCTATTAGCTTTTTCTGAGATAGAATCAATCCTCCAGGTTGTTGGATCAGCTGCGCTCATTCAGTTTGCAAGCAAGAAGCTTTTGTTTGCTGAGGACCGAGAGCAAACTGTGAAACAACTTGGTGAGTTCTTGAACACCAAGGTTGCCCCCAAAGAACTTGTTGATGAAATAAAGGATATTGGAAAGGCTCTTCTACCATCCTCTACCGATAATAAGGCTCTTCCTGCTCCGGCAGAGAAAAGTTCAGAGCTTGCTACAGCTGATAGCACTGTACAGAGagcagtagctactcccgagtccaaagctgaagcagtagcaactcccgagcccaaagtggatgcagtagctCCTGAAGTAAACTCTGTGCCCAAAACTGAAGTCAAGGCAGAAGAATCACTTCCTGTGCAACCAAGGCCACTTTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTACCCCTTCACAGCCCTAG 1368 0.4371 MEALNAAGLTPLSVLSDTKTTRTKHPSVSVCKVSNFSTSTNKKQTLLQSCISKTLHGGLILAASVVNGGAATALTYDEALGQPLSLPGAGDFDVNGFVESVTGFAAENPAILAGGVAVLAVPLVLSQVLFKKPKAWGVESAKNAYAKLGADGNAQLLDIRALVEIRQVGSPDVGGLKKKAVSIPYKGDDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWKSSGLPWIEPRKTLSFDNLTDAISEAIGDTTDGVAVTLGVAAAAAGLSLLAFSEIESILQVVGSAALIQFASKKLLFAEDREQTVKQLGEFLNTKVAPKELVDEIKDIGKALLPSSTDNKALPAPAEKSSELATADSTVQRAVATPESKAEAVATPEPKVDAVAPEVNSVPKTEVKAEESLPVQPRPLSPYPYYPDFKPPTSPTPSQP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00236 455 MobiDBLite consensus disorder prediction 392 455 - -
Gma16g00236 455 Gene3D - 135 265 IPR036873 -
Gma16g00236 455 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 455 - -
Gma16g00236 455 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 455 IPR044240 -
Gma16g00236 455 MobiDBLite consensus disorder prediction 432 455 - -
Gma16g00236 455 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 138 256 IPR036873 -
Gma16g00236 455 ProSiteProfiles Rhodanese domain profile. 150 256 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00236 Gma-Chr16 2550901 2556114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00236 1 445 Sulfurtransferasese or Rhodanese AT4G01050 56.077 9.32e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00236 K17525 - gmx:100784482 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00236 16 2550901 2556114 Gma16g00236 16 2550901 2556114 ECH
Gma07g00535 07 5155774 5161089 Gma16g00236 16 2550901 2556114 GST