Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00226 ATGTTGACGATGATGATCATCACTGCGCTCATCACTGCCATAATTGCGGGACTTTGCATTGGTCCGATCAACGGCCGGCGGCGGAGGAAGAGAGCCGTGGGGTTCTTCCATCCGTACACCAACGACGGCGGCGGCGGGGAGAGGGTGCTGTGGTGCGCCGTGAGAGGCATCCAGGAGGAAAGCCCCGACCTTGATTGCTATGTGTACACCGGAGATCATGACGCCACCCCTCAATCGCTCATGGCTCGTGCCCTCGATCGCTTTGGGGTCACGCTCCTCTCTTCTCCAAAGGTGGTTCTTTTGTACAAGAGAAAGTGGATTGAAGAGACTACTTATCCGCACTTTACCATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCATGGGAGGCTTTGTGCAAGTTTACCCCAATGTATTACTTTGACACAAGTGGATATGCTTTTACATACCCACTTGCTCGGTTGTTTGGATGCAAAGTTATTTGCTATACACATTATCCTACTATCAGCTCAGACATGTTAGCTCGTGTTCGTCAGCACAGCTTCATGTATAATAACGATGCCTTAATTACAAAAAGTGTTTGGCTTTCAAGGTGCAAAATAGTCTATTATACAGTATTCAGCTGCTTGTATGGATTTGTAGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACTAAATCCCATATTGAAAATCTTTGGAGATTTCCTGACCGTATTAAGCGAGTCTATCCTCCTTGTGATACTTCTGGACTCCAGCAGGTACTTCCCTTGGAACGATCAGCAGAAATTCCTGTATTAATATCTGTTGCACAATTTCGACCGGAGAAGGCACACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTACCTTGCCAAAACCTAAGTTCCAAATTGTGGGTAGCTGTAGAAATAAATCAGATGAAGACAGACTTCAAATGTTAAAGGAGAAAGCAATTGAGCTGAATGTGAATGAACATGTAGAATTTCATAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGCATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTGGTAGAATACATGGCTGCTGGTGCCATTCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTATTAGATGAAGATGGACAGCAAACAGGATTTCTTGCCTGCACTGTTGAAGAATATGCAGATGCCATGGTGAGAATTGTATCGATGTCGGAGATGGAGAGACTAAAGATGGCTGCAGCCGCAAGGAGACAGGCGAGGAGGTTTTCCGAGCAGAGGTTTTATGATGACTTCAAAGCTGCAGTGCGTCCTATCCTGTCTCATACTTCTAGGTGA 1386 0.4524 MLTMMIITALITAIIAGLCIGPINGRRRRKRAVGFFHPYTNDGGGGERVLWCAVRGIQEESPDLDCYVYTGDHDATPQSLMARALDRFGVTLLSSPKVVLLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPMYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQHSFMYNNDALITKSVWLSRCKIVYYTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDRIKRVYPPCDTSGLQQVLPLERSAEIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDEDRLQMLKEKAIELNVNEHVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAMVRIVSMSEMERLKMAAAARRQARRFSEQRFYDDFKAAVRPILSHTSR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00226 461 Gene3D Glycogen Phosphorylase B; 250 439 - -
Gma16g00226 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 32 455 - -
Gma16g00226 461 Pfam ALG11 mannosyltransferase N-terminus 31 236 IPR031814 -
Gma16g00226 461 Pfam Glycosyl transferases group 1 267 433 IPR001296 GO:0016757
Gma16g00226 461 CDD GT4_ALG11-like 31 447 IPR038013 GO:0004377
Gma16g00226 461 Coils Coil 312 332 - -
Gma16g00226 461 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 22 456 IPR038013 GO:0004377
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00226 Gma-Chr16 2438747 2443449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00226 218 444 Glycosyltransferase AT1G78800 26.809 2.95e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00226 K03844 - gmx:100801617 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00526 07 5056236 5060909 Gma16g00226 16 2438747 2443449 GST