Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00222 ATGAGGATCGTGTTAAATGTGCTGGAGTTAGTTAAAATTTACGGATTAAATTATCCGGTGTTGAAGAAGAAGAGATATTATCTGAGTTTGTCCTGTTTAGTGTTGGGTACAAGACTGTTCTGCACATCCACTGTGGTTGAGGAATGTGAGATTGTTGAACTTTTACAGCAAATTGATACAAAGACAAAGAAGCCTTTGAAAAAGAAAGTTCTCTTTGTGAAGAATGGAGCTGTTGTAGTGTACCATGTTCAGGTTAATAACTCTATTTGCGTCGAGAAGTTCTCTGATTTTCCACAACTTGGGAGGTTCACTCTTCGCACTGAGGGAAAAACTGTTGCCGTGGGAAAAGTCACTGGTCTGTGA 363 0.3939 MRIVLNVLELVKIYGLNYPVLKKKRYYLSLSCLVLGTRLFCTSTVVEECEIVELLQQIDTKTKKPLKKKVLFVKNGAVVVYHVQVNNSICVEKFSDFPQLGRFTLRTEGKTVAVGKVTGL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00222 120 PANTHER BNAA06G12300D PROTEIN 44 114 - -
Gma16g00222 120 PANTHER TRANSLATION FACTOR 44 114 - -
Gma16g00222 120 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 39 119 IPR009001 -
Gma16g00222 120 Pfam Elongation factor Tu C-terminal domain 40 119 IPR004160 -
Gma16g00222 120 Gene3D Translation factors 34 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00222 Gma-Chr16 2409205 2410585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00222 33 118 Eukaryotic Initiation Factors Gene Family AT5G10630 40.449 2.30e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00222 K03267 - gmx:100784412 134.035