Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00200 ATGAATTCTGGTGCTGTCTTGGCATTGCCTCCAGTAAGCAATGTATTCAGGACAAGGGAACCTCATGATTTTGAGGATGACTTTGTGGAGAAAGATCCAACTGGCCGGTACATAAGGTACAATGAAATCTTGGGTAGAGGTGCCTTCAAAACCGTTTATAGGGGTTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGATGGCCTCATGCATTCAGTAGATGATCTTGCGAAATTGTATTCTGAAGTTAATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATGATTCTTGGATTGATGATAAGCAGAAAACTGTTAACATGATTACTGAACTCTTCACATCAGGAAATTTAAGGCTATATCGTAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATCCTTCATGGCTTAGTATATCTTCACAGTCACAGGCCACCCATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGTGAAGTTAAGATAGGGGACCTTGGTTTAGCAGTTGTCATGCAACAACCAACTGCCCAAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGCATACACTGAACTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAATATCCCTATAGTGAATGCAAAAATCCTGCTCAAATCTTTAAGAAAGTTACCTCAGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGATCCCCAACTTAAGGAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCCATCCTTTATCCTTTACAACCGCCTAGCCGAACACTGAGAGCATATTCATTCAAGTCTGGTTCTCTATCTATGGACATGGATTCTGACTGCAAACCGTTTTCTATGAGTATCTGTTCTGAAAGCAACCAGGAAAACCCACATTGTCCTGTTTTTGAAGTGCAGCGGACAAATAATAAACACGAGTTTAGGTTGAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGCAGGTCGAGTCCGGAATATACATTTTCTCTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCACAGAGATGGTTGAACATTTGGAGCTGGCAGATCATGATGTAGATTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTACCTTGGTGGAAGCCCTCACCTGATCATTTCTCATGTGGAGAATTAAGTCCTTATAGTACAAATATAGATGGCCAATGGCCATGGGGTTCTGTCCTAACTAGTATTCCCTCTGAATTGGCTATTGATCAGGATGGCTTCTCTGGGTCTGATACAACTCCCAAAGAAGATTTTGTTGCATCTGAGAAGAGCAGCGTTTCCAAAAATGATAGCAATGCTACTTTTGAGGGTGATTGTAATTCTTCTAGTCTGGTTAAATTGGAAGATCGATATTCACAAGGATCTAGAGCTTCTGAGATGATTGTTGAAAACACTTCTATGAAAAATGACAATTGTCATGATTCCAATGCTGATGTAAGTTCTGAAAGCTTAAGTAATTCCATGTCTGAACTTGAGATTGGGGGTGCATATTTTGAGGACTGTAAATTGCAACCAGCAGAATATTGTTCTGGAGAAGGAGTTGTGATAAATGAATTCCCAAAGAACTCAGGGTCAGTTCTTGGAACGTCCATTAATGTTGAGAACCCTACAAATAGTTGTTCTTATGTGTCATCAACAGAAGAGGACATTATTGATCTTGAGCTACAGTTTAAACTTGATGAAATTGAGGCACACTATCAGCATTGGATTGATGAACTTAAGAAAATGATGTTGGAGGCATTGGATTCCACCAGAAGGAGTTGGGTGGCCAAGAAGAAATTGGCTGTTCAGTGA 2025 0.3941 MNSGAVLALPPVSNVFRTREPHDFEDDFVEKDPTGRYIRYNEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLMHSVDDLAKLYSEVNLLKSLKHENIIKFYDSWIDDKQKTVNMITELFTSGNLRLYRKKHKYVEMKAIKGWARQILHGLVYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAVVMQQPTAQSVIGTPEFMAPELYEEAYTELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTSGIKPASLNKVSDPQLKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPILYPLQPPSRTLRAYSFKSGSLSMDMDSDCKPFSMSICSESNQENPHCPVFEVQRTNNKHEFRLKGTKNDDNSVSLTLRIADTCAGRVRNIHFLFYLDTDTAVSVATEMVEHLELADHDVDFIAELIDYLIMKLLPWWKPSPDHFSCGELSPYSTNIDGQWPWGSVLTSIPSELAIDQDGFSGSDTTPKEDFVASEKSSVSKNDSNATFEGDCNSSSLVKLEDRYSQGSRASEMIVENTSMKNDNCHDSNADVSSESLSNSMSELEIGGAYFEDCKLQPAEYCSGEGVVINEFPKNSGSVLGTSINVENPTNSCSYVSSTEEDIIDLELQFKLDEIEAHYQHWIDELKKMMLEALDSTRRSWVAKKKLAVQ 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00200 674 Coils Coil 636 656 - -
Gma16g00200 674 Gene3D - 375 440 - -
Gma16g00200 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gma16g00200 674 SUPERFAMILY Protein kinase-like (PK-like) 40 349 IPR011009 -
Gma16g00200 674 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Gma16g00200 674 PANTHER KINASE DOMAIN PROTEIN 2 674 - -
Gma16g00200 674 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00200 674 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 674 - -
Gma16g00200 674 CDD STKc_WNK 36 295 - -
Gma16g00200 674 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 434 IPR024678 GO:0004674|GO:0005524
Gma16g00200 674 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Gma16g00200 674 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00200 674 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00200 Gma-Chr16 2130433 2134562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00200 25 521 MAP Kinase Kinase Kinase AT5G41990 55.336 1.48e-172 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma16g00200 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00200 K08867 - gmx:100809602 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00200 16 2130433 2134562 Gma16g00200 16 2130433 2134562 ECH
Gma07g00504 07 4746887 4750501 Gma16g00200 16 2130433 2134562 GST