Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00190 ATGAAGATCTTCAATTGGGTTCACAAGAGGTTTCATCATCACAACACTCTGAAAGATGGGTTTGCTACAAACATGAAAAAGACTGAACCTACAATTAACAACACGGATAGTCAAGCTTTGCTGAAACAAGTTGCCCTCACTGAATCACTTGGTGGATGGGAAGATGGCATTCTAACCATTGGCACTCTCGGCTATGATCCCTTAAAGAGCATCAACCCTCACAAAGAATACTTTGCTTTGGAGATTGAAGTTGAACAAGAAGATGGTGAAGGAGAGAACAACATCATGGTTGATGATCATCAGGAGGAGGAAAAGGGCTATAATGCTGCGCACGAGGAACTGAATCCATTGATATACAACTCATTTGAGCACAACTTTGAGGTGGATGTTGTTAGTGAAAACAACCATGATGATGGTGATGTGGTAGTTAGAAGCTTCAATGATGAAATTGTTGTGGCTCCACCTGTGATCTCTTATGAAGTCATGGAATCAAACGATGTGGATGCTGATGAAAAGAAGAAGAAAGGAGAAAGGATCACACTAGCTGATCTCTTCTTGGCTGACACTGATGTTAAGATAAAGCTTGACCCTTATGCCAAAGTCTGCCACCTTGCTTCAAGTGAAAAACCAAACCTTAAAGCAAAGCATGGACTCTCTTTTGCCAAGAAGCTCATTCCCCGTGTTAAAGACAATCCCCATCCAATGAAAGATATCAAAAAACTGATGAAGAAGATGTTGAAGAGGAAAATCCACCCGGATCTTGATGTCAAGAATCACAAACCAGAAGTTATTTCCTTCCAATTTAAGGTACTAGCTAGTATTGAGCTGATGGGAGTATCACTCTTTAATCATCTGAAAACAAAGACCATCTTTCTCTTTTCTGTATCACCGTTGGAAGAGACTGAGATGGGTTCAAAAACCAAGACTTTTACCTTTGAAGAGGTGGCTAAACACAATCACAGGAAGGATTGTTGGATTATAGTCAAAGGGAAGGTGTATGATGTCACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGTTTTAGTGACTGCAACAGAGAAGGATGCCACCACTGATTTTGAAGATATTGGCCACAGTGATTCAGCAACACAGATGATGGAAAAATACTTTGTTGGGGAGGTTGACACCAACACTCTTCCAGCACAAGTTACCAGCAACAACAGTGTACGCCAACCAACACAAGCACCACCTGCCTATAACAATCAATCTTCAGGATTTGTTGTGAAGATGTTGCAGTACATAGTGCCATTGCTGATATTGGCCTTTGCATTTGGCCTGCAGTACTATGGCAAAAAAAACAAGTCCACTGAGTCAGAAAATTGA 1347 0.4105 MKIFNWVHKRFHHHNTLKDGFATNMKKTEPTINNTDSQALLKQVALTESLGGWEDGILTIGTLGYDPLKSINPHKEYFALEIEVEQEDGEGENNIMVDDHQEEEKGYNAAHEELNPLIYNSFEHNFEVDVVSENNHDDGDVVVRSFNDEIVVAPPVISYEVMESNDVDADEKKKKGERITLADLFLADTDVKIKLDPYAKVCHLASSEKPNLKAKHGLSFAKKLIPRVKDNPHPMKDIKKLMKKMLKRKIHPDLDVKNHKPEVISFQFKVLASIELMGVSLFNHLKTKTIFLFSVSPLEETEMGSKTKTFTFEEVAKHNHRKDCWIIVKGKVYDVTPFLDDHPGGDEVLVTATEKDATTDFEDIGHSDSATQMMEKYFVGEVDTNTLPAQVTSNNSVRQPTQAPPAYNNQSSGFVVKMLQYIVPLLILAFAFGLQYYGKKNKSTESEN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00190 448 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 305 393 IPR036400 -
Gma16g00190 448 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 338 345 IPR018506 GO:0020037
Gma16g00190 448 SMART Cyt_b5_2 310 383 IPR001199 -
Gma16g00190 448 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE HST1-LIKE PROTEIN 1 263 IPR044989 GO:0001763
Gma16g00190 448 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 307 383 IPR001199 -
Gma16g00190 448 PRINTS Cytochrome B5 signature 342 356 IPR001199 -
Gma16g00190 448 PRINTS Cytochrome B5 signature 332 342 IPR001199 -
Gma16g00190 448 PRINTS Cytochrome B5 signature 357 364 IPR001199 -
Gma16g00190 448 PRINTS Cytochrome B5 signature 370 382 IPR001199 -
Gma16g00190 448 Gene3D - 300 387 IPR036400 -
Gma16g00190 448 Pfam Cytochrome b5-like Heme/Steroid binding domain 311 382 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00190 Gma-Chr16 2015227 2028241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00190 303 441 NADPH P450 reductases AT5G53560 55.000 3.31e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00190 - - gmx:100777156 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00190 16 2015227 2028241 Gma16g00190 16 2015227 2028241 ECH
Gma07g00493 07 4645096 4649130 Gma16g00190 16 2015227 2028241 GST