Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00186 ATGTTGGAGGAGGGTGAAGAAAGCTATAACTTGGAATTAGAAGTTCCGGTTACAAATCGTCCCTACCCCCACCACCATCGTAGAAAGAAAGTGTTAGCTAAAGATATACCAAAAGGGTTTTTGCCAATCAAGGTAGGGCAAGGTGAAGAACAACAAAAAATTGTGATGCCTATTGTGTACCTCAACCACCCTTTGTTTTCTCAGCTACTCAAGGAGGCAGAGGAAGAGTATGGTTTTGATCAACAAGGAACCATAATTATCCCTTGCCATGTGAAGGACTTTAGGTACGTTCAAGGCCTCATTGATAAGGAGAAGTCCTCCCAACACCAACACCATGTCATAAGCTGTTTTAGGCCTTCTTCACGTTATTAA 372 0.422 MLEEGEESYNLELEVPVTNRPYPHHHRRKKVLAKDIPKGFLPIKVGQGEEQQKIVMPIVYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHVKDFRYVQGLIDKEKSSQHQHHVISCFRPSSRY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00186 123 Pfam Auxin responsive protein 30 98 IPR003676 GO:0009733
Gma16g00186 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 24 113 - -
Gma16g00186 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00186 Gma-Chr16 1932849 1933464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00186 35 102 Calmodulin-binding Proteins AT3G43120 45.588 1.91e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00186 - K14488 gmx:100808516 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00186 16 1932849 1933464 Gma16g00186 16 1932849 1933464 ECH
Gma19g02439 19 52863126 52864043 Gma16g00186 16 1932849 1933464 ECH
Gma07g00488 07 4558269 4559187 Gma16g00186 16 1932849 1933464 GST
Gma19g02439 19 52863126 52864043 Gma16g00186 16 1932849 1933464 PCT
Gma16g00186 16 1932849 1933464 Gma19g02439 19 52863126 52864043 PCT