Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00179 ATGAGCGGGAAGCAGGCCGTGAGACCTCGTACCCGCGTGGGAAAGTACGAGCTGGGAAAAACCATTGGCGAGGGAAGCTTTGCTAAGGTCAAGTTCGCTAAGAACGTTGAGAATGGTAACCATGTTGCCATCAAAATCCTTGATCGTAACCATGTCCTCCGCCACAAGATGATGGAACAGGCACaaatttctgcgatgaagatgatcaatcatccaaacgttgtcaaaatttacgagGTGATGGCAAGCAAAACAAAGATCTATATTGTCCTAGAGTtggttaatggaggagaactatttaacaaaataGCTAAAAATGGGAAACTTAAAGAGGATGAAGCAAGAAGATATTTCCATCAATTAATCAATGCCGTTGATTATTGCCACAGCAGAGGCGTGTACCACAGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCACAACAGGAGGATGAACTTCTCCGAACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGATGAGCCAAATCATGCGGCACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTGAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAACAAGCAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGAGAAACCCGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGTGGAAGGAAGGGTCACCTTTCAGTTGCTACAGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACCGGGGGTGACACACTAGAGTTTCACAAGGCATGTTTCTACAAAAACTTTTCATCATCATCAGGGTTGCAAGACGTTGTGTGGCATTCTGAAGAAAAACAATGA 1317 0.3964 MSGKQAVRPRTRVGKYELGKTIGEGSFAKVKFAKNVENGNHVAIKILDRNHVLRHKMMEQAQISAMKMINHPNVVKIYEVMASKTKIYIVLELVNGGELFNKIAKNGKLKEDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVTDFGLSTYAQQEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPNHAALYKKIGRAQFTCPSWFSPEAKKLLKLILDPNPLTRIKVPELLEDEWFKKGYKQATFIMEEDINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLENLFEKQQGSVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKACFYKNFSSSSGLQDVVWHSEEKQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00179 438 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gma16g00179 438 SUPERFAMILY Protein kinase-like (PK-like) 13 308 IPR011009 -
Gma16g00179 438 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Gma16g00179 438 Gene3D Transferase(Phosphotransferase) domain 1 94 294 - -
Gma16g00179 438 Pfam NAF domain 306 366 IPR004041 GO:0007165
Gma16g00179 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gma16g00179 438 ProSiteProfiles Protein kinase domain profile. 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00179 438 Gene3D Kinase associated domain 1, KA1 303 433 - -
Gma16g00179 438 PANTHER - 10 435 - -
Gma16g00179 438 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00179 438 SMART serkin_6 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00179 438 CDD CIPK_C 310 423 - -
Gma16g00179 438 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 10 435 - -
Gma16g00179 438 Gene3D Phosphorylase Kinase; domain 1 6 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00179 Gma-Chr16 1836359 1843128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00179 1 435 CBL-interacting serine-threonine protein kinases AT1G01140 73.483 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma16g00179 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00179 - - gmx:100791002 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00179 16 1836359 1843128 Gma16g00179 16 1836359 1843128 ECH
Gma07g00481 07 4463795 4470173 Gma16g00179 16 1836359 1843128 GST