Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00174 ATGGGGAAGAAGGGAAGTGGTAGTTCGTGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGAAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAAGAAAAGAAGAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCACGAAGGAGTGAACAACAACAGCAACCACACTACTCAACAAAAGGTGCAGCATGATGTGGCAGCAAGTGGGGGTGGTTCAAGGACAGACCAGGATCAGAAGCATGCACTTGCTGTGGCCATGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGCGGAGGTGGCAAGGTTGTCCAAACCTGCTAGCCATGCCAGGGAGCATTTTGCTGCTGTTGTGATCCAAACTGCTTTCAGAGGGTATCTTGCTAGAAGAGCGCTTCGTGCACTGAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTTCTTGACCAACGCATAAGGTCTTCACTTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTGCTAGTGTTTGGGACTCACGGTATCTTCAGGACATTTCAGATAGGAAATCAATAtcaagagagggaagcagcattgcagatgactgggatgaaaggcatcattcagttgaagaagtgaaggccatgttgatgcagaggaaggaagctgctgcaatgaagagggacaagaccttatctcaagccttttccgaacagatttggaggaatggtagaacatcatcaattggaaatgaagatgagttggaagagagaccaaaatggctagatcggtggatggccacaaagccatgggagaatagaggaagggcttcaactgatcaaagagaccccattaagactgtggaaattgacacatctcagccttattcatatctaggaaccaattacagaagatcacatccaaattatcaatacaacccaaACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCTCCCTTCACCAATCCCCTGCCACCCCTTCTCCTGCCAAATCAAGGCCTATCCAAGTCCGGTCGGCTAGTCCACGTTGCGTTAGAGACGACAGAAGCTACCACACCTCCCAAACACCAAGCTTGAGGTCTAATTACCACTACACAGGAAACTTGTACCAAAATGGAAGGATTGTTTCAACTGGAACTAGTAGTGGTGGTGCTACTGCTACATTGCCTAATTACATGGCGGCAACTGAGTCTGCAAAGGCTCGAATTCGGTCGCAAAGCGCGCCGAGGCAGAGGCCATCCACACCAGAGAGGGACAGGGTTGGATCAGCAAAGAAAAGGCTTTCTTTTCCTGCTCCTGACCCTTATGGTGTGGGAGTGAGTTATGGAAACTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGAGGGTTAGAGCAACAATCAAACTACTCCTCTTGCTACACTGAGAGTATTGGTGGTGGTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGGTGGTTGAGATGA 1653 0.3835 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVNNNSNHTTQQKVQHDVAASGGGSRTDQDQKHALAVAMATAEAAMATAQAAAEVARLSKPASHAREHFAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERHHSVEEVKAMLMQRKEAAAMKRDKTLSQAFSEQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCVRDDRSYHTSQTPSLRSNYHYTGNLYQNGRIVSTGTSSGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCYTESIGGGGGEVSPSSTGDLRRWLR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00174 550 MobiDBLite consensus disorder prediction 321 386 - -
Gma16g00174 550 MobiDBLite consensus disorder prediction 1 89 - -
Gma16g00174 550 Pfam Protein of unknown function (DUF4005) 392 496 IPR025064 -
Gma16g00174 550 MobiDBLite consensus disorder prediction 59 89 - -
Gma16g00174 550 MobiDBLite consensus disorder prediction 451 483 - -
Gma16g00174 550 PANTHER IQ-DOMAIN 5-RELATED 6 550 - -
Gma16g00174 550 MobiDBLite consensus disorder prediction 19 57 - -
Gma16g00174 550 SMART iq_5 127 149 IPR000048 GO:0005515
Gma16g00174 550 SMART iq_5 150 171 IPR000048 GO:0005515
Gma16g00174 550 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Gma16g00174 550 MobiDBLite consensus disorder prediction 305 414 - -
Gma16g00174 550 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 6 550 - -
Gma16g00174 550 MobiDBLite consensus disorder prediction 305 320 - -
Gma16g00174 550 MobiDBLite consensus disorder prediction 524 550 - -
Gma16g00174 550 Gene3D - 125 180 - -
Gma16g00174 550 Pfam IQ calmodulin-binding motif 131 149 IPR000048 GO:0005515
Gma16g00174 550 Pfam IQ calmodulin-binding motif 155 171 IPR000048 GO:0005515
Gma16g00174 550 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00174 Gma-Chr16 1783079 1785425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00174 10 550 IQD Protein Family AT4G00820 57.014 3.83e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00174 - - gmx:100799284 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00174 16 1783079 1785425 Gma16g00174 16 1783079 1785425 ECH
Gma07g00479 07 4444690 4448622 Gma16g00174 16 1783079 1785425 GST