Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00156 ATGGAAGCACAAAGCTCCCAGCATACCCAAGTTATTGAGATCAGTGGTGACTTTCCTGATGGTGGAAGGAAGATTTGTGCGGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCTAAGGACTCTGAAGAAAGATCAACTTCTATGCGAAAGCTTTTCATGGCAGTGGTCCTTTGTGTTATTTTCATGACCGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCATTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAAATGATATGGTTGCTTGCTGGGATTCTGGTATATGAAGCCATTGATAGAATCATTGCCGGTCCTAAAAGTGTGGATGGTTTTTTAATGTTTTTAGTTGCTGCATTTGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGggtcatgatcatggccacggacatgatggtcatggtcacggtcacggtcacggtcacggtcacggacatgatggtcatggccacagtcaTGGATTTACAGTGTCTACCCATTGTGATGCAAAGCATACAAAAGATGAGCACCATCACACACATGATGATCATGCACACCATCATGATGAAAACCTTTCAAAAGATGCTCACCATCATACTGAGGAAGATCACTTGCACCATCATGCTCACAAAGATGTTACTGAACCTCTTCTTGGTGAATCAAAAGGTGGAACTAAGAAGAAGAAGCAATGGAACATAAATGTGCAGGGGGCTTATCTCCATGTTCTTGGGGACTCTATCCAAAGTATTGGGGTAATGATTGGGGGAGCAGTCATATGGTATAACCCTCGTTGGCAAATAGTTGATTTAATCTGCACTCTAATCTTTTCAATAATTGTTCTGGGGACAACCATCAACATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCCGTTCATGAACTGCATATATGGGCCATTACAGTGGGAAAGGTTTTGCTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGCCATGTCACTATACAGATAGAGCGCTAG 1260 0.3929 MEAQSSQHTQVIEISGDFPDGGRKICAEAPCGFADAGSISKDSEERSTSMRKLFMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHGHGHGHDGHGHSHGFTVSTHCDAKHTKDEHHHTHDDHAHHHDENLSKDAHHHTEEDHLHHHAHKDVTEPLLGESKGGTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYNPRWQIVDLICTLIFSIIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00156 419 MobiDBLite consensus disorder prediction 200 271 - -
Gma16g00156 419 TIGRFAM CDF: cation diffusion facilitator family transporter 50 419 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma16g00156 419 MobiDBLite consensus disorder prediction 182 271 - -
Gma16g00156 419 PANTHER METAL TOLERANCE PROTEIN A1 1 419 - -
Gma16g00156 419 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 342 IPR027469 -
Gma16g00156 419 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 347 418 IPR036837 -
Gma16g00156 419 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 419 - -
Gma16g00156 419 Pfam Cation efflux family 53 341 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma16g00156 419 Gene3D Cation efflux protein transmembrane domain 49 340 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00156 Gma-Chr16 1605735 1610192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00156 24 419 Inorganic Solute Cotransporters AT3G61940 57.935 3.80e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00156 K14689 - gmx:100794876 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00156 16 1605735 1610192 Gma16g00156 16 1605735 1610192 ECH