Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00148 ATGGAGAACATAATTTCCATATGTGATCACATGCCTGTAGGATTCAGATTCCGTCCCACAGATGAAGAGCTTGTCGACTATTACCTCAAACACAAGCTTCTGGCTGATGATTTCCCTGTCCACATCATCCCTGAAATCGACCTTTGCAAGGTGGAACCTTGGGACGTACCAGGAAGATCAGTGATCAAATCCGATGACCCAGAATGGTTTTTCTTCAGTCCTGTGGATTACAAGTACTTGAAGAGTAAAAGGTTTAACAGGACAACCAAGCGTGGCTTCTGGAAAGCCACTGGGAATGACCGGAAAATAAGGATACCGGGCACCAGCAATGTCATTGGGACTAAGAAGACTCTTGTTTTCCACCAAGGCCGTGTTCCCCGTGGTGCCAAGACCAACTGGGTTATTCATGAATACCATGCTGTTACCTCCCATGAAAGCCAGAGGGCTTTTGTTTTGTGCCGCTTGATGAAGAAAGCTGAGAAAAAAAATGAAGGGGGAATTGAGGCACCGTCTTTTGATGAAGGGGAGCCCAGTATACACATGGTTTCTGACTATGGAAATCCGGCAAGAGCAGAAGGCATTGCATCTGTAGATATTATTCCTGGAGTAGATATGGATGAAATCTTTCGGGCAGTGGATCAAGCTGAGAAATTCTCCCCCCCAGTACAACAGTCTCCAACTGGCATTGGGCTGGAAGATTTTTTCCCAAACTCTCCATTGTTCAATGCCCGTTTTGGAAGTGAAAACATCAATATGCAAACTTCACTTGAAGTTACGGATGACGAAGATGAGTTGGTAAATTCATTTTTGGTTTATGATGAAGAATTTGTTATCAATGAAGAAAGAAGACACTGTTTTGTCAATAGTTCCACCCAACCAAAGTCATTGAGAAGGGTATACAATGAAAGCAGTGGAAATTGTTCTGGTGAATACCCTGCATTGAAAATGTTTAAATCGTCACATGATGTTGTCCGTGGTGGCCCAAGTCGTCTAGCTTTGAACCAAAAAGCAAACAAAGAGAAAAAGGAGAGTATCATTCAAGATGATCTTTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCAATTGAAATTTCTAGCTCTCCTTCCACTCCAACAAGATTGAAAAATCAGTATCATCTAAGACCAGAAAACCTCATATTACAAAGAACTGTAGCAGGAAGACCTCAAACACAGAAGGTTTCAAACAATGCAGTATCCCATCTAGAGGTTCAGAAGGAATTGCTCACTGTGAAATCAGAAAAAGATCAGAAAAATGCTCAAAATACTAGTTCAAGAGGGAACTTAAAAAACAAAAGCCAACAATCCTCTGATGTCAACAACAATGGTTCTTTCTTTTACATGGAGATGACTTCAAATCAAAGCCTATTTCCACGATACGGTTTTCGTCCAACAGATGAAGAGCTTGTGAAGTTCTACCTCAAACACAAGTTGCTCGATGATGATCCCTGTGTCCACTTCATCCTCGACGTTGACCTTTGTGAAGTGGAACCTTGGGACTTACCATTGTTATTAGCAGATTCAGCTGTGCGATTCAATGGCCGTGAATGGTTCTTCTTCAGTCCTGTCGATTACAAGTATTCAAATAGTAAAAGGGTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACTGGAAAAGACCGTGGCATTAGGAGCAAGGACACCAACAATGTCATCGGGACTAAGAAAACTCTAGTTTACTATCAAGGCCGTGTTTCTAGTGGTGTCAAGTCCAATTGGGTTATTCATGAATATCATGCTGTTACCTTTCATGAAAGCCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAACCTGGGAAAACAACTGAAGGTGGAACTGATGCACTGATCTGTGATGAAGGGGGGCCCAGTAGAAGCATGGTTTCTGACTATGAAAATCAGGCAACAACACAAGGAATTCCATCTGGAGGTACTTTTACAGGAATGGAAACAACCTTTCAGGGAATGCATCTGGCTGAGAAATACTTCTCCCCAACACAACAGTCTCCCACTGGTATTGAGCAGGAAGAACCATCCTTTACAAACTATCCATTTAACAATGCCTATTTTAGAAATGAAGACAACTTTATGCAGACTCCATTTGAAACTAAGGAGGAAGATGCGTTCCTGAATTCAATTTTTGTTGATGAGAATTTAGTTATCAATGAAGAAAGTATGCATGCTTTTGTCAATAGCTCCACCCAATCAGAGTCATTGAGAAGGGTATATTGTGAAAGCAGTGATACAGATGCTGAATCTCTGACTCTTATTGAGCAGGAAGGAGCATCCTTTCCAAACTATGCATTTAACAATGCCTATTTTAGAAATGAAGACAACATTATGCAGACTCCATTTGAAACTACAAAGGAAGATGAATTCCTAAATTTAATCTTAGCCGATGAAAGTATAGTGATCAATGAAGAAAATAAGCATGATTTTGTCAATAGCTCTACCCAATCAGAGTCATTGAAAAGGGTATACTGTGAAAGCAGTGATACAGATGCTGAAGTCATCTCTAAACTGGATGACAATATTGTGGATATTTCAACAGCATGTAATGATTATCCTAATTCAGATGAATACTATTCATCAAAAAGGTTTAAATCATCACATGATGCTGTCCATGGTGGAATATGTTTTCTACCTTCTAACCTTGAAGCAAACCAAGAGAAAAACGAGAGTATGTTTCAAGATAGTTTCTGGGGAGCAGAGACATCATCTTGTGACTCGACACTAGATAAACCTTTGGAGATCAATTATATTGATATTTCTAGTTCTCCTTTCACTCCATGGAGATGA 2835 0.4049 MENIISICDHMPVGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPGRSVIKSDDPEWFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVFHQGRVPRGAKTNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPSFDEGEPSIHMVSDYGNPARAEGIASVDIIPGVDMDEIFRAVDQAEKFSPPVQQSPTGIGLEDFFPNSPLFNARFGSENINMQTSLEVTDDEDELVNSFLVYDEEFVINEERRHCFVNSSTQPKSLRRVYNESSGNCSGEYPALKMFKSSHDVVRGGPSRLALNQKANKEKKESIIQDDLWAVETSSCDSTADEPIEISSSPSTPTRLKNQYHLRPENLILQRTVAGRPQTQKVSNNAVSHLEVQKELLTVKSEKDQKNAQNTSSRGNLKNKSQQSSDVNNNGSFFYMEMTSNQSLFPRYGFRPTDEELVKFYLKHKLLDDDPCVHFILDVDLCEVEPWDLPLLLADSAVRFNGREWFFFSPVDYKYSNSKRVNRTTKCGFWKPTGKDRGIRSKDTNNVIGTKKTLVYYQGRVSSGVKSNWVIHEYHAVTFHESQRTFVLCRLMKKPGKTTEGGTDALICDEGGPSRSMVSDYENQATTQGIPSGGTFTGMETTFQGMHLAEKYFSPTQQSPTGIEQEEPSFTNYPFNNAYFRNEDNFMQTPFETKEEDAFLNSIFVDENLVINEESMHAFVNSSTQSESLRRVYCESSDTDAESLTLIEQEGASFPNYAFNNAYFRNEDNIMQTPFETTKEDEFLNLILADESIVINEENKHDFVNSSTQSESLKRVYCESSDTDAEVISKLDDNIVDISTACNDYPNSDEYYSSKRFKSSHDAVHGGICFLPSNLEANQEKNESMFQDSFWGAETSSCDSTLDKPLEINYIDISSSPFTPWR 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00148 944 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 447 - -
Gma16g00148 944 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 469 860 - -
Gma16g00148 944 Gene3D NAC domain 475 620 IPR036093 GO:0003677|GO:0006355
Gma16g00148 944 MobiDBLite consensus disorder prediction 420 447 - -
Gma16g00148 944 ProSiteProfiles NAC domain profile. 466 616 IPR003441 GO:0003677|GO:0006355
Gma16g00148 944 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 447 - -
Gma16g00148 944 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 469 860 - -
Gma16g00148 944 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Gma16g00148 944 SUPERFAMILY NAC domain 9 158 IPR036093 GO:0003677|GO:0006355
Gma16g00148 944 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Gma16g00148 944 MobiDBLite consensus disorder prediction 425 447 - -
Gma16g00148 944 Pfam No apical meristem (NAM) protein 468 597 IPR003441 GO:0003677|GO:0006355
Gma16g00148 944 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Gma16g00148 944 SUPERFAMILY NAC domain 456 616 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00148 Gma-Chr16 1443175 1467715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00148 458 616 NAC Transcription Factor Family AT3G49530 43.902 5.38e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma16g00148 NAM 6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00148 - - gsj:114419327 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00148 16 1443175 1467715 Gma16g00148 16 1443175 1467715 ECH
Gma07g00451 07 4123218 4125665 Gma16g00148 16 1443175 1467715 GST