Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma16g00138 | ATGGTGCTGGATCCAGCAAGGCTGGTGCTGGTGCTTTTGATCAGCACCTGCATTTTGGCCATCAATGGTGACACAGATCCAAATGACATTACTTCTCTAAAGGTTTTGTTTCAAAGTATGAACTCACCTTCCCAGCTAAATTGGAATGGTGATGATCCCTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAGTCACAGAGATTAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTACCAGCTAGAACCCTTGTCATCTGTCACAAACCTAGACTTAAGTAACAACAATATTGGTGGCACCATACCATACCAACTTCCTCCTAATCTGCAGTACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATCCCTTATTCCCTTTCTGAAAAGACTTCGCTTGTAATCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCGTTCAATTCTTTGACAGGTGACCTGCCTCAGACTATGAGCTCACTTTCTAGCATAAGAACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGGAACTTTGAATGTGGGAAACAATCATTTTACAGGCTGGATACCAGAACAATTGAATAACATAATACAAAAGGATGGTAATGAATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTATCAAGAAATCGAAATCACAAATCTGGGGGTCATAGCCCATCAGATGCTGGCTCAAGTGACGGTGGAGGCAAAAAATCTGGTATAGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGAGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAAAAGTCATTTAATGATGTTGAAAAGCTTGACAATCAACCCTTGGCTCAACATGAAGTGCACGAAATGAATTCCATGCAAACTTCATCTGTAACTGATTTTAAGACATTTGATACATCTGCGGCCCCAATAAGCCTTAAACCTCCTCCTTTTGATCGTCGCAAATCATTTGATGAGGATGAGTTTTCAAACAAGCCCGTTATAGTCAATAAGCCCACTAAAGTCAAGAAGACTGTAACAGCTCCTGCAAATGTAAAATCATATTCTATAGCTGACCTCCAGATTGCTACTGGAAGCTTCAGCGTGGAGCAACTTCTTGGTGAGGGGTCTTTTGGACGCGTATACCGTGCTCAATTTGATGACGGAAAGGTTCTTGCCGTGAAGAAGATCGATTCATCTGTCCTTCCCAATGATATGTCTGACGATTTTGTAGAACTAGTTTCAAACATATCCCAATTGCATGATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGCCAACACCTACTAGTCTACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTGTAGTAAACCATTGATATGGAATTCACGAGTGAAAATTGCTTTGGGGATTGCACGCGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAACATATTGCTTGATACAGATTTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTAAACAATAATGCTGGATCTGGATATGAAGCTCCCGAAGTTGGTTTGTCTGGTCATTATACTCTTAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCGTTTGATAGCTCAAGGCCGAGGTCTGAGCAGGCGTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTTTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTATACCCTGTGAAGTCCCTTTCTCGATTTGCGGATGTTATTGCTCTATGCGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGCAAGAGGACGTTTGGAACTGATCAAGGAGGATCCAACAGAGGGGGATTTCAGATTTGGGTTGGTGCACTGTTGGGTTTAGGGTGTGATGGGGTTTGGATCGAGGTTTTGGTGGCGACACAATGGTCGCAACATGAACCAAATTGTAAAAGTTGGTTAGTTGAGGAAGAGCACGATGGGATCATGAATAATGTCGATTCTGATGGAGATACAATGACTTTCACCACCATAAATGTAGCAGTGGCCCTTGTTACTGATGAGCCAAACGCATTTGCTAGTGTCATCAGAACCATCATGTAA | 2370 | 0.4308 | MVLDPARLVLVLLISTCILAINGDTDPNDITSLKVLFQSMNSPSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLEPLSSVTNLDLSNNNIGGTIPYQLPPNLQYLNLANNNFNGAIPYSLSEKTSLVILNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTMSSLSSIRTMYLQNNQFTGTIDVLANLPLGTLNVGNNHFTGWIPEQLNNIIQKDGNEWSSGPAPPPPPGTPPVVSRNRNHKSGGHSPSDAGSSDGGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKRRSKKSFNDVEKLDNQPLAQHEVHEMNSMQTSSVTDFKTFDTSAAPISLKPPPFDRRKSFDEDEFSNKPVIVNKPTKVKKTVTAPANVKSYSIADLQIATGSFSVEQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDMSDDFVELVSNISQLHDPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDECSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQALVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGFQIWVGALLGLGCDGVWIEVLVATQWSQHEPNCKSWLVEEEHDGIMNNVDSDGDTMTFTTINVAVALVTDEPNAFASVIRTIM | 789 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma16g00138 | 789 | SUPERFAMILY | L domain-like | 27 | 229 | - | - | |
Gma16g00138 | 789 | SUPERFAMILY | Protein kinase-like (PK-like) | 386 | 681 | IPR011009 | - | |
Gma16g00138 | 789 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 701 | - | - | |
Gma16g00138 | 789 | ProSiteProfiles | Protein kinase domain profile. | 409 | 684 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma16g00138 | 789 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Gma16g00138 | 789 | Pfam | Protein tyrosine and serine/threonine kinase | 411 | 681 | IPR001245 | GO:0004672|GO:0006468 | |
Gma16g00138 | 789 | Gene3D | Ribonuclease Inhibitor | 137 | 236 | IPR032675 | - | |
Gma16g00138 | 789 | PRINTS | Leucine-rich repeat signature | 159 | 172 | - | - | |
Gma16g00138 | 789 | PRINTS | Leucine-rich repeat signature | 92 | 105 | - | - | |
Gma16g00138 | 789 | ProSitePatterns | Protein kinases ATP-binding region signature. | 415 | 438 | IPR017441 | GO:0005524 | |
Gma16g00138 | 789 | PANTHER | STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN | 15 | 706 | - | - | |
Gma16g00138 | 789 | Pfam | Leucine rich repeat N-terminal domain | 27 | 64 | IPR013210 | - | |
Gma16g00138 | 789 | Gene3D | Ribonuclease Inhibitor | 29 | 136 | IPR032675 | - | |
Gma16g00138 | 789 | MobiDBLite | consensus disorder prediction | 232 | 277 | - | - | |
Gma16g00138 | 789 | PANTHER | OS01G0253100 PROTEIN | 15 | 706 | IPR045271 | GO:0004714|GO:0006468 | |
Gma16g00138 | 789 | Gene3D | Phosphorylase Kinase; domain 1 | 372 | 486 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma16g00138 | Gma-Chr16 | 1357689 | 1367729 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma16g00138 | 9 | 706 | Strubbelig Receptor Gene Family | AT1G53730 | 65.139 | 0.0 | 850 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-V | Gma16g00138 | PK_Tyr_Ser-Thr | 2.2e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma16g00138 | - | - | gmx:100817422 | 1305.04 |