Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00138 ATGGTGCTGGATCCAGCAAGGCTGGTGCTGGTGCTTTTGATCAGCACCTGCATTTTGGCCATCAATGGTGACACAGATCCAAATGACATTACTTCTCTAAAGGTTTTGTTTCAAAGTATGAACTCACCTTCCCAGCTAAATTGGAATGGTGATGATCCCTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAGTCACAGAGATTAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTACCAGCTAGAACCCTTGTCATCTGTCACAAACCTAGACTTAAGTAACAACAATATTGGTGGCACCATACCATACCAACTTCCTCCTAATCTGCAGTACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATCCCTTATTCCCTTTCTGAAAAGACTTCGCTTGTAATCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCGTTCAATTCTTTGACAGGTGACCTGCCTCAGACTATGAGCTCACTTTCTAGCATAAGAACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGGAACTTTGAATGTGGGAAACAATCATTTTACAGGCTGGATACCAGAACAATTGAATAACATAATACAAAAGGATGGTAATGAATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTATCAAGAAATCGAAATCACAAATCTGGGGGTCATAGCCCATCAGATGCTGGCTCAAGTGACGGTGGAGGCAAAAAATCTGGTATAGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGAGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAAAAGTCATTTAATGATGTTGAAAAGCTTGACAATCAACCCTTGGCTCAACATGAAGTGCACGAAATGAATTCCATGCAAACTTCATCTGTAACTGATTTTAAGACATTTGATACATCTGCGGCCCCAATAAGCCTTAAACCTCCTCCTTTTGATCGTCGCAAATCATTTGATGAGGATGAGTTTTCAAACAAGCCCGTTATAGTCAATAAGCCCACTAAAGTCAAGAAGACTGTAACAGCTCCTGCAAATGTAAAATCATATTCTATAGCTGACCTCCAGATTGCTACTGGAAGCTTCAGCGTGGAGCAACTTCTTGGTGAGGGGTCTTTTGGACGCGTATACCGTGCTCAATTTGATGACGGAAAGGTTCTTGCCGTGAAGAAGATCGATTCATCTGTCCTTCCCAATGATATGTCTGACGATTTTGTAGAACTAGTTTCAAACATATCCCAATTGCATGATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGCCAACACCTACTAGTCTACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTGTAGTAAACCATTGATATGGAATTCACGAGTGAAAATTGCTTTGGGGATTGCACGCGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAACATATTGCTTGATACAGATTTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTAAACAATAATGCTGGATCTGGATATGAAGCTCCCGAAGTTGGTTTGTCTGGTCATTATACTCTTAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCGTTTGATAGCTCAAGGCCGAGGTCTGAGCAGGCGTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTTTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTATACCCTGTGAAGTCCCTTTCTCGATTTGCGGATGTTATTGCTCTATGCGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGATTAGTGCAGCGAACTAACATGAGCAAGAGGACGTTTGGAACTGATCAAGGAGGATCCAACAGAGGGGGATTTCAGATTTGGGTTGGTGCACTGTTGGGTTTAGGGTGTGATGGGGTTTGGATCGAGGTTTTGGTGGCGACACAATGGTCGCAACATGAACCAAATTGTAAAAGTTGGTTAGTTGAGGAAGAGCACGATGGGATCATGAATAATGTCGATTCTGATGGAGATACAATGACTTTCACCACCATAAATGTAGCAGTGGCCCTTGTTACTGATGAGCCAAACGCATTTGCTAGTGTCATCAGAACCATCATGTAA 2370 0.4308 MVLDPARLVLVLLISTCILAINGDTDPNDITSLKVLFQSMNSPSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLEPLSSVTNLDLSNNNIGGTIPYQLPPNLQYLNLANNNFNGAIPYSLSEKTSLVILNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTMSSLSSIRTMYLQNNQFTGTIDVLANLPLGTLNVGNNHFTGWIPEQLNNIIQKDGNEWSSGPAPPPPPGTPPVVSRNRNHKSGGHSPSDAGSSDGGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKRRSKKSFNDVEKLDNQPLAQHEVHEMNSMQTSSVTDFKTFDTSAAPISLKPPPFDRRKSFDEDEFSNKPVIVNKPTKVKKTVTAPANVKSYSIADLQIATGSFSVEQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDMSDDFVELVSNISQLHDPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDECSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQALVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGFQIWVGALLGLGCDGVWIEVLVATQWSQHEPNCKSWLVEEEHDGIMNNVDSDGDTMTFTTINVAVALVTDEPNAFASVIRTIM 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00138 789 SUPERFAMILY L domain-like 27 229 - -
Gma16g00138 789 SUPERFAMILY Protein kinase-like (PK-like) 386 681 IPR011009 -
Gma16g00138 789 Gene3D Transferase(Phosphotransferase) domain 1 488 701 - -
Gma16g00138 789 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00138 789 MobiDBLite consensus disorder prediction 254 268 - -
Gma16g00138 789 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
Gma16g00138 789 Gene3D Ribonuclease Inhibitor 137 236 IPR032675 -
Gma16g00138 789 PRINTS Leucine-rich repeat signature 159 172 - -
Gma16g00138 789 PRINTS Leucine-rich repeat signature 92 105 - -
Gma16g00138 789 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Gma16g00138 789 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 15 706 - -
Gma16g00138 789 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Gma16g00138 789 Gene3D Ribonuclease Inhibitor 29 136 IPR032675 -
Gma16g00138 789 MobiDBLite consensus disorder prediction 232 277 - -
Gma16g00138 789 PANTHER OS01G0253100 PROTEIN 15 706 IPR045271 GO:0004714|GO:0006468
Gma16g00138 789 Gene3D Phosphorylase Kinase; domain 1 372 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00138 Gma-Chr16 1357689 1367729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00138 9 706 Strubbelig Receptor Gene Family AT1G53730 65.139 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma16g00138 PK_Tyr_Ser-Thr 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00138 - - gmx:100817422 1305.04