Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00134 ATGACCAACCATCACCTCAAACACTCCATTCTCTCCTCCTCAGTTTTTCTCATGCCATCACCATCTTCATCTTCTTCTGCATATTCCCTTTACATGGTTTCCAAGTTAATGGTCTCAATCATAGTCTCCTTATTCCTTTTGTCCTTGTTTGTTTTCCAAGTCTCCTCTTGTGACCAGATTGATAAACTGTCCCTCTTGGCCTTCTCTGGCAACATATCCACCTCTCCACCTTATCCTTCTCTTGATTGGTCTGATTCTCTTGATTGTTGTAGCTGGGAAGGCATTACTTGTGATGGAGATCTTAGAGTCACACACCTTTTGCTACCATCTAGAGGCCTCACTGGCTTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCCCATAATAGATTGTCTGGTACTCTCCAACACCACTTTTTCTCATTGCTCAATCACTTGTTGGTTCTTGATTTGAGCTACAACCGTCTCTCTGGTGAGTTGCCACCTTTTGTTGGTGATATTAGCAGCGATGGTGTTATTCAGGAGCTGGATTTGTCTAGTAACCTTTTCAATGGGGCACTTCCAAATTCTTTGCTTGAGCACTTGGCAGCTGCAGCAGCTGGAGGGAGTTTTGTGTCTTTGAATGTTAGTAATAACAGTCTCACAGCCTGGACTAGGAGCATGTTCCAAGTTGGAGAAGTTCAGAGCAGACTCACTGGAACAATTGGTGATGGCATTGTTGGACTTAGCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCACAGGTTCAATCCCCCATGATATTGGTGAACTCTCCAAGCTGGAACGGTTACTCCTTCATGTCAACAATTTGACAGGTACTATGCCCCAATCTCTGATGAACTGTGTCAATCTTGTGGTATTGAATTTAAGGGTCAACGTCTTGGAGGGAAATCTCTCTGCATTCAATTTCTCAGGATTCCTCAGACTTACCACACTTGACCTTGGCAACAATCATTTTACTGGTGTTTTACCACCAACACTTTATGCATGCAAGTCACTTTCAGCTGTGAGGCTAGCATCTAATAAACTTGAGGGAGAGATTTCACCCAAGATACTTGAACTAGAGTCTTTGTCTTTCCTATCAATTTCTACTAACAAGTTGAGGAATGTCACTGGGGCTCTTAGAATACTCAGGGGGCTCAAGAACCTTAGTACCCTTATGCTCTCCAAGAATTTTTTCAATGAAATGATACCACAAGATGTGAACATAATAGAGCCGGATGGATTCCAAAAACTCCAGGTTTTAGGATTTGGTGGTTGTAATTTCACAGGTCAAATACCAGGTTGGCTTGCAAAACTGAAGAAGCTTGAGGTCTTGGACCTGTCCTTTAATCAAATTAGTGGTCCAATTCCTCCTTGGTTGGGTAAACTTTCTCAGCTTTTTTACATGGACTTGTCTGTTAACCTCCTTACAGGAGTATTTCCAGTAGAGCTCACAGAACTCCCAGCACTGGCATCACAGCAGGCAAATGATAAAGTGGAAAGGACTTACTTTGAGTTACCTGTGTTTGCTAATGCAAACAATGTTTCCCTACTGCAATATAATCAGCTTTCAGGCCTACCTCCAGCAATATATCTGGGAAGCAATCACCTTAATGGAAGTATCCCTATTGAGATTGGGAAACTCAAAGTCCTTCATCAGCTGGATCTGAAAAAGAACAACTTCTCTGGCAGTATACCAGTTCAGTTTTCAAACTTGACTAACTTAGAGAAACTAGACCTCTCCGGAAACCAACTATCTGGGGAAATTCCTGATTCCCTCAGAAGATTACATTTCTTGTCTTTTTTCAGTGTAGCATTCAATAATCTTCAAGGACAGATACCCACTGGTGGTCAATTTGATACTTTCTCCAACTCCAGCTTTGAAGGAAATGTGCAATTGTGCGGTTTGGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTAATACTACTGCAGCTAGTCGCAGCTCAAACAAAAAAGTGCTGCTTGTACTCATCATTGGAGTCAGTTTTGGCTTTGCTTCCTTGATAGGAGTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGTGTCTGACAAGATTGAAATGGAATCAATTTCTGCCTATTCCAACAATGGAGTTCATCCTGAGGTTGACAAGGAGGCTAGCTTAGTGGTATTGTTTCCCAACAAGAATAATGAAACCAAGGACCTTACCATATTTGAGATCCTAAAATCCACTGAAAATTTCAGTCAGGAAAACATAATAGGATGCGGCGGTTTTGGTTTGGTTTACAAAGCAACATTACCAAATGGAACTACACTGGCCATCAAGAAACTTTCAGGAGACTTGGGCCTCATGGAAAGGGAATTCAAAGCAGAAGTAGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTGGCATTGCAAGGCTATTGTGTGCATGATGGATTCCGGCTTCTCATGTATAATTACATGGAAAATGGAAGCCTGGACTACTGGTTGCATGAAAAGCCTGATGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATCGCACAAGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATATGCGAGCCACACATTGTGCATCGTGATATAAAGTCGAGCAACATACTCCTTAATGAAAAATTTGAGGCACATGTTGCTGATTTTGGGTTGTCTAGATTGATTCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGCTACATTCcaccagagtatggacaagcgtgggtggctactctgagaggagatgtgtacagctttggggttgtcatgcttgaactgatcactgggagaaggcctgtagatgtatgcaagccaaaaatgtcaagggagTTGGTTGGCTGGGTTCAACAAATGAGGATTGAAGGAAAACAAGATCAAGTATTTGACCCTCTTCTGAGAGGGAAGGGGTTTGAAGTACAGATGCTAAAGGTACTGGATGTGGCTTGCATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTTGGATCAGACAACCAGCCAACACAGAAATAA 3123 0.4054 MTNHHLKHSILSSSVFLMPSPSSSSSAYSLYMVSKLMVSIIVSLFLLSLFVFQVSSCDQIDKLSLLAFSGNISTSPPYPSLDWSDSLDCCSWEGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSHLNLSHNRLSGTLQHHFFSLLNHLLVLDLSYNRLSGELPPFVGDISSDGVIQELDLSSNLFNGALPNSLLEHLAAAAAGGSFVSLNVSNNSLTAWTRSMFQVGEVQSRLTGTIGDGIVGLSNLTVLELYSNHFTGSIPHDIGELSKLERLLLHVNNLTGTMPQSLMNCVNLVVLNLRVNVLEGNLSAFNFSGFLRLTTLDLGNNHFTGVLPPTLYACKSLSAVRLASNKLEGEISPKILELESLSFLSISTNKLRNVTGALRILRGLKNLSTLMLSKNFFNEMIPQDVNIIEPDGFQKLQVLGFGGCNFTGQIPGWLAKLKKLEVLDLSFNQISGPIPPWLGKLSQLFYMDLSVNLLTGVFPVELTELPALASQQANDKVERTYFELPVFANANNVSLLQYNQLSGLPPAIYLGSNHLNGSIPIEIGKLKVLHQLDLKKNNFSGSIPVQFSNLTNLEKLDLSGNQLSGEIPDSLRRLHFLSFFSVAFNNLQGQIPTGGQFDTFSNSSFEGNVQLCGLVIQRSCPSQQNTNTTAASRSSNKKVLLVLIIGVSFGFASLIGVLTLWILSKRRVNPGGVSDKIEMESISAYSNNGVHPEVDKEASLVVLFPNKNNETKDLTIFEILKSTENFSQENIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLMYNYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELITGRRPVDVCKPKMSRELVGWVQQMRIEGKQDQVFDPLLRGKGFEVQMLKVLDVACMCVSHNPFKRPSIREVVEWLKNVGSDNQPTQK 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00134 1040 Pfam Leucine Rich Repeat 323 342 IPR001611 GO:0005515
Gma16g00134 1040 Pfam Leucine Rich Repeat 450 472 IPR001611 GO:0005515
Gma16g00134 1040 SUPERFAMILY L domain-like 424 647 - -
Gma16g00134 1040 Gene3D Phosphorylase Kinase; domain 1 721 832 - -
Gma16g00134 1040 PANTHER LEUCINE RICH REPEAT KINASE 2 37 283 - -
Gma16g00134 1040 Gene3D Ribonuclease Inhibitor 234 317 IPR032675 -
Gma16g00134 1040 Pfam Protein kinase domain 758 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00134 1040 ProSiteProfiles Protein kinase domain profile. 757 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00134 1040 PANTHER OS06G0692500 PROTEIN 37 283 - -
Gma16g00134 1040 SMART LRR_typ_2 124 148 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 321 345 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 369 391 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 581 605 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 448 472 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 149 173 IPR003591 -
Gma16g00134 1040 SMART LRR_typ_2 248 272 IPR003591 -
Gma16g00134 1040 Gene3D Transferase(Phosphotransferase) domain 1 833 1040 - -
Gma16g00134 1040 PANTHER LEUCINE RICH REPEAT KINASE 2 280 1032 - -
Gma16g00134 1040 SUPERFAMILY Protein kinase-like (PK-like) 743 1028 IPR011009 -
Gma16g00134 1040 PRINTS Leucine-rich repeat signature 581 594 - -
Gma16g00134 1040 PRINTS Leucine-rich repeat signature 127 140 - -
Gma16g00134 1040 PANTHER OS06G0692500 PROTEIN 280 1032 - -
Gma16g00134 1040 Pfam Leucine rich repeat N-terminal domain 61 98 IPR013210 -
Gma16g00134 1040 ProSitePatterns Protein kinases ATP-binding region signature. 763 786 IPR017441 GO:0005524
Gma16g00134 1040 SUPERFAMILY RNI-like 106 496 - -
Gma16g00134 1040 Pfam Leucine rich repeat 539 594 IPR001611 GO:0005515
Gma16g00134 1040 Gene3D Ribonuclease Inhibitor 59 233 IPR032675 -
Gma16g00134 1040 ProSiteProfiles Leucine-rich repeat profile. 583 605 IPR001611 GO:0005515
Gma16g00134 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 879 891 IPR008271 GO:0004672|GO:0006468
Gma16g00134 1040 SMART serkin_6 757 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00134 1040 Gene3D Ribonuclease Inhibitor 318 660 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00134 Gma-Chr16 1319804 1323109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00134 32 692 Miscellaneous Gene Families AT1G17240 46.741 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gma16g00134 Pkinase 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00134 - - gmx:100807989 1711.04