Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00098 ATGGGTATATCGCCGGAGACCACGGAAGAAGTTTCACCACACTCCAATCACATTCCGCCACGTCACCCACCCTTCCTCTGCCCTCTCCCCACGTGTCGACGGTCACCGTCAACTCACCCTCTTCCGTCTAACGAAACCCCAAAAAAGATCGGCGGCGAGGAGGATATGGACGACGACGACGAGATCCAGTCGCATCCTTCGCCGGCGAGCGGATCCCCTCCGTCGTCGCCGAGGTCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCAGGCGCAGCCACCACCGCCGAATAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGGAACGGCGGAGGAGGAGGAGGAGGAGGAGGCGGTGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGAGATCGTGAGCGGACGAGAGGATTTCACGAAGGCGCCGAAGACAGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGTGCCACCAGCAAGTGGCCGTTCTACGACCGATTGGAACAATTAATTGGTCCTAGCGCCAAGATCCCCGGCGCCGGAAACAGTAATTCACAACCGCAGAAAGTTCCGTTAGGGATTCCGGTCGGTGTTCGCAGCAGCGCGAATCAGTTTCACCATCCTCACAAACAGCCACAGAGGCAGCAACCACAATCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGATTCCGATTCGGAGGAGCGCGACGCGTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGCTTCGAGCGGAAGAGGCCGCGGTTGATGAGTTCTAACACCGCGAAAGGAAGCGGAGAAAGACGGAAGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACTCAGGCGATTCTGAAATTCGGTGAGGCTTATGAACAAGCAGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCGAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCTTGAAGACGCAGCTGGAGATTTCGCAGCTCAAGCTTGGAAGGAAAGGTGGTAACCCTAGCAACAATCTCAATGGCACCACCAACAATAACAACAACAATCATAACAATAATAGTGACAGTGAATGA 1278 0.5712 MGISPETTEEVSPHSNHIPPRHPPFLCPLPTCRRSPSTHPLPSNETPKKIGGEEDMDDDDEIQSHPSPASGSPPSSPRSNGRITVTVAAPAPQAQPPPPNSLALALPIQQPAKGNGGGGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDFTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGAGNSNSQPQKVPLGIPVGVRSSANQFHHPHKQPQRQQPQSVPLKNQKIQFRRRGPPVDSDSEERDASSPASSDSFPPESFERKRPRLMSSNTAKGSGERRKAKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFLKTQLEISQLKLGRKGGNPSNNLNGTTNNNNNNHNNNSDSE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00098 425 Gene3D - 132 197 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 253 274 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 65 83 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 398 425 - -
Gma16g00098 425 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 56 395 IPR044823 -
Gma16g00098 425 MobiDBLite consensus disorder prediction 279 295 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 396 425 - -
Gma16g00098 425 Pfam Myb/SANT-like DNA-binding domain 129 219 IPR044822 -
Gma16g00098 425 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 56 395 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 1 130 - -
Gma16g00098 425 MobiDBLite consensus disorder prediction 222 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00098 Gma-Chr16 988543 990089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00098 56 406 Trihelix Transcription Factor Family AT3G14180 46.485 5.05e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma16g00098 Myb_DNA-bind_4 2.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00098 - - gmx:100782874 573.548