Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00084 ATGGAGAGCCTCCCGCTTGAGACGGCGGAGAAGATCATCCTGCGCTGGGACTCCACCGCGTCGGAGGATGCCCGCGACAAGATGATATTCTCCGGCGGCGTGGACCGCGATGAGGCCGATCTCTACCTCCAAGCCGTGGACGAAATCCAACGGTCCCTCTCCTCCGTCTCCGTCTCCTCCTCCGACAAAGTCAACTCCGCCATCCAGATTGCCATGGCCCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCATCCCCTTCGACCCTTCCACCTCCGAAGACGATCCCTCCCAAACCCTCCCAGACCTTCTTCCTTCCTCCACCTCTTCCCCAAAACACCCTCTCACCAACCTCGAACAAGATTCAACAGAAACTGAGCCAGAAACTACTAACACCACCACCACCACCACTCCTCTCCTCCGTTTCAACAGTGACGGCGCTGCTTCCTCTGTTCACTCTTCTGTTTCCTCCGTCAACTCCGTTAACAGCAGCAGTTACCGTTCCACCAGCAGCATCCGCGAGATCGATCTGATCCCCTCCGACGCCGTCTACGACCTCCGCTGCATCGCCGAGCGCATGCTCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGTTCGAAAATCCTCCGTCGACGCGAGCTTCCGCAAGCTCCACATCGAAAAGCTCAGCATCGGAGACGTTCAGCGCCTCGAGTGGGAGCAGCTCGAGAACAAAATCAGACGCTGGATAAAAGCCGCCAAGGTCTGCGTCAGAACTCTCTTCGCGAGCGAGAAGAAGCTCTGCGAGCAAATCTTCGACGGCGTCGGAACTTCCATCGACGACGCTTGCTTCATGGAGACGGTGAAAGGTCCCGCGATTCAGCTCTTCAACTTCGCCGAGGCGATTAGCATAAGCCGTAGGTCGCCGGAGAAGCTGTTCAAGATTCTCGATTTGCATGACGCCTTGACGGATTTGATGCCGGATATCGACGTCGTGTTTGATTCGAAGTCGTCGGAGTCGATTAGGGTTCAGGCGGCGGAGATTTTGTCGCGGTTGGGTGAGGCTGCGAGGGGGATTTTGTCCGAATTCGAAAACGCTGTGCTGAAGGAACCTTCTAGGGTTCCTGTTCCTGGTGGAACGATTCACCCTTTGACTCGGTATTCGGGAGATGTTGGGATACCAGATATGGATTTGAGTGAGTATGAGGAGAAGACACCTTTGGATGTTCACTTGATTTGGATTATTGTGATTTTGCAATTCAACTTGGATGGGAAGAGTAAGCACTACAGGGATGCTTCTCTGGCTCACCTTTTTATCATGAACAATGTGCACTACATTGTTCAGAAGGTGAGAGGGAGTTCCGAGTTGAGGGAGATGATTGGGGATGACTACTTGAAGAAGCTCACCGGGAAGTTCCGGCAGGCTGCCACGAGATACCAGAGGGAGACGTGGGTGAAGGTGTTGTATTATTTGAGGGACGAGGGGTTGCATGCCAGTGGGGGGTTTTCATCCGGGGTGTCCAAGAGTGCTCTCAGGGATAGGTTTAAGACTTTCAATTCCATGTTTGAGGAGGTTCACAGGACGCAGGCGGTTTGGTTGATACCGGATTCACAGCTCAGGGAGGAGCTGAGGATATCTATATCGGAGAAGCTCATTCCCGCGTATAGGTCGTTTCTTGGGAGGTTCAGGAGCTACATTGAGAGTGGGAGGCATCCGGAGAATTACATCAAGTACTCTGTGGAGGACCTGGAGTATGCTGTTTTGGACTTCTTCGAAGGGATTCCTGTTTCCCAGCACTTGAGAAGGAGATCTGAATGA 1818 0.538 MESLPLETAEKIILRWDSTASEDARDKMIFSGGVDRDEADLYLQAVDEIQRSLSSVSVSSSDKVNSAIQIAMARLEDEFRNILISHTIPFDPSTSEDDPSQTLPDLLPSSTSSPKHPLTNLEQDSTETEPETTNTTTTTTPLLRFNSDGAASSVHSSVSSVNSVNSSSYRSTSSIREIDLIPSDAVYDLRCIAERMLSSGYLRECIQVYGSVRKSSVDASFRKLHIEKLSIGDVQRLEWEQLENKIRRWIKAAKVCVRTLFASEKKLCEQIFDGVGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTDLMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLKEPSRVPVPGGTIHPLTRYSGDVGIPDMDLSEYEEKTPLDVHLIWIIVILQFNLDGKSKHYRDASLAHLFIMNNVHYIVQKVRGSSELREMIGDDYLKKLTGKFRQAATRYQRETWVKVLYYLRDEGLHASGGFSSGVSKSALRDRFKTFNSMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSYIESGRHPENYIKYSVEDLEYAVLDFFEGIPVSQHLRRRSE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00084 605 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 389 604 - -
Gma16g00084 605 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 125 - -
Gma16g00084 605 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 135 387 - -
Gma16g00084 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 389 604 IPR004140 GO:0000145|GO:0006887
Gma16g00084 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 125 IPR004140 GO:0000145|GO:0006887
Gma16g00084 605 SUPERFAMILY Cullin repeat-like 36 592 IPR016159 -
Gma16g00084 605 MobiDBLite consensus disorder prediction 89 144 - -
Gma16g00084 605 Gene3D Exocyst complex component Exo70 16 125 - -
Gma16g00084 605 Gene3D Exocyst complex component Exo70 126 601 - -
Gma16g00084 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 135 387 IPR004140 GO:0000145|GO:0006887
Gma16g00084 605 Pfam Exo70 exocyst complex subunit 401 585 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma16g00084 605 Pfam Exo70 exocyst complex subunit 248 387 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00084 Gma-Chr16 872484 874388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00084 6 605 EXO70 exocyst subunit family AT1G72470 64.809 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00084 K07195 - gmx:100812980 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00386 07 3480482 3482850 Gma16g00084 16 872484 874388 GST