LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma16g00072	ATGGCAATAGAATTGGCATCTCCCAATTGGGTTCCAACCGCAGCCGCATGTTTGGCAGCCTTGGCCGCCCTCCTCCTCTTCCTCCTCCGCGGTCTCCGCCGCCGTAAATACAATCTCCCCCCAGGCCCCAAGCCCTGGCCCATCATAGGCAACCTAAACTTAATCGGCTCCCTCCCACACCAGTCGATTCACGCGCTGAGTAAAACATACGGGCCCATCATGCACGTGTGGTTCGGGTCGAACCCCGTCGTGGTGGGCTCATCCGTGGACATGGCGAAGGCCATCCTCAAAACCCACGATGCCACCCTCGCCGGCAGGCCCAAATTCGCGGCGGGCAAATACACAACCTACAACTACTCGGACATCACTTGGTCCCAGTACGGCCCATACTGGCGCCAGGCCCGTAGAATGTGCCTGATGGAATTATTCAGTGCTAAACGCTTAGAAGAATACGAATACATTAGAAAACAAGAGCTTCGTGGCCTTCTTAACGAACTCTTCAATTCCGCAAACAAAACAATTTTACTAAAAGACCACCTTTCCAACCTTAGCCTCAACGTTATAAGCCGCATGGTGTTGGGAAAAAAGTACCTTGAGGAATCCGAAAACGCCGTCGTTTCGCCCGATGATTTCAAGAAGATGCTTGATGAGTTGTTTTTGCTTAATGGGGTGTATAACATCGGGGACTTTATTCCTTGGATTGATTTCTTGGACCTGCAGGGTTACATAAAGAGGATGAAGGCTTTGAGCAAGAAGTTTGATATGTTCATGGAGCACGTCTTGGATGAACATATTGAGAGGAAGAAAGGGGTTGAGGATTACGTGGCGAAGGACATGGTTGATGTTCTTTTGCAACTTGCCGAGGATCCTACTCTTGAGGTCAAGCTTGAGAGGCATGGAGTCAAGGCTTTTACACAGgatctaatagcaggtgggactgagagttcagcagtaacagtggaatgggcaatcacagagctattgagaaggccagagattttcaagaaggcaacagaggagctagacaggAATGAGGATTTGAATATGGATGAGATTTTTGGGCTCTCTACACCTAAGAAAATACCACTGGAAACTGTTGTTGAGCCTAGGCTTCCACACCATCTTTATTCTCTCTGA	1137	0.4433	MAIELASPNWVPTAAACLAALAALLLFLLRGLRRRKYNLPPGPKPWPIIGNLNLIGSLPHQSIHALSKTYGPIMHVWFGSNPVVVGSSVDMAKAILKTHDATLAGRPKFAAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKQELRGLLNELFNSANKTILLKDHLSNLSLNVISRMVLGKKYLEESENAVVSPDDFKKMLDELFLLNGVYNIGDFIPWIDFLDLQGYIKRMKALSKKFDMFMEHVLDEHIERKKGVEDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAITELLRRPEIFKKATEELDRNEDLNMDEIFGLSTPKKIPLETVVEPRLPHHLYSL	378

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma16g00072	378	PANTHER	CYTOCHROME P450 98A9	7	343	-	-
Gma16g00072	378	PANTHER	CYTOCHROME P450 98A9	344	377	-	-
Gma16g00072	378	Pfam	Cytochrome P450	40	343	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	SUPERFAMILY	Cytochrome P450	32	346	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	PRINTS	E-class P450 group I signature	91	112	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	PRINTS	E-class P450 group I signature	67	86	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	PRINTS	E-class P450 group I signature	320	346	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	PRINTS	E-class P450 group I signature	183	201	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	PRINTS	E-class P450 group I signature	300	317	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gma16g00072	378	Gene3D	Cytochrome P450	32	363	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma16g00072	Gma-Chr16	730865	733103	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma16g00072	18	352	Cytochrome P450	AT5G07990	38.218	2.77e-76	243

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma16g00072	K20623		-	gmx:100790480	663.685

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma07g00374	07	3346141	3349494	Gma16g00072	16	730865	733103	GST

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