Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00068 ATGATCATGGAACCAAATCCAACATCAGATCACAGTCTAGACTGGTTTGAAGGTTCTGTGTCTTACTTTCCACCACTCTTAGATTATCCATACGACTCTGGTGACATCCAAGACTATCAGTTGTGGGAACAAGACATAACCAGCCACTACCAAACTGATACCAATACCAGTTCTTCCCCTAATGCTACCAACATTTCTACAACCACAACACCCCTTGAGACTTGTGACTCTAATAACAACCTACCACTTTCTGATTTGCCAAAGAAAAGAAATGCCACTGATGAGTCTAGTCCCAAACCACCACAAAACCACAAGCACAAGAAAATCAAGAGCAAACCAATAAACAATGAAGCCTATACCGGACACGCAGAAGGGACAACAACAACAACAGTTAGAAAATCTGGTGGGAACAAGAAAGGGGGAGCTAAGGCCAATGGAAATAACTGCAACAACAAGGATGGTAGATGGGCAGAACAGTTGCTGAACCCTTGTGCTGCAGCCATAACAGGTGGAAACCTGAACCGTGTGCAACACCTCTCGTATGTTCTCCATGAGTTAGCATCACCTACTGGCGATGCTAACCACAGGCTTGCAGCACATGGTCTTAAAGCACTGACACAACATCTATCATCTTCTCCCTCTTCAGGGTCTATAACTTTTGCTTCCAGCGAGCCGCGGTTCTTCCAAAAGACACTCCTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTCCCTAACAACATAGCAAATGCTTCCATCCTTCAAGTTCTTGGCGAAGACACTGATAATAATTCACGCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGAATGCAATGGCCAACTTTTCTTGAGGCCTTGAGTCGCAGACCTGGTGGACCTCCTCCGTTGGTTCGCCTCACCGTGGTCACTGCTTCTTCCTCCACTGAAAATGACACACCATTTTGTATTGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCAATGAATGTTAACTTGCAGATAAACAAACTAGATAACTGTCCATTGCATACTCTGAATGCTCAAAGTGTTGACACCTCCCCGGATGAAATCTTTGTTGTGTGTGCACAGTTTAGGTTGCATCAGTTGAATCACAATGCCCCTGATGAAAGGAGTGAGTTTCTGAAGGTGTTGAGAAACATGGAGCCCAAAGGGGTGATACTAAGTGACAACAACATGGGATGTTGTTGCAATTGTTGTGGGGATTTCACCACTGGATTCTCTCGGAGGGTGGAGTACTTGTGGAGGTTTTTGGACTCAACAAGCTCCGCGTTCAAGGGCCGGGAGAGCGACGAGAGGAGAGTGATGGAAGGTGAGGCTGCGAAGGCATTGACAAACCAGCGCGAGACGAATGAAGGGAAGGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGGGGGAAGTATTTGGAGAGGATGCAATAGATGGAGGTAGAGCTTTGCTGAGGAAGTATGATGGTAATTGGGAGATGAAAGTGGAAGATGACAATACAAGTGTTGGACTATGGTGGAAGGGGCAAAGTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGGAATTATAAGACCTCAACATTTACATCATGA 1632 0.4547 MIMEPNPTSDHSLDWFEGSVSYFPPLLDYPYDSGDIQDYQLWEQDITSHYQTDTNTSSSPNATNISTTTTPLETCDSNNNLPLSDLPKKRNATDESSPKPPQNHKHKKIKSKPINNEAYTGHAEGTTTTTVRKSGGNKKGGAKANGNNCNNKDGRWAEQLLNPCAAAITGGNLNRVQHLSYVLHELASPTGDANHRLAAHGLKALTQHLSSSPSSGSITFASSEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGEDTDNNSRTLHILDIGVSHGMQWPTFLEALSRRPGGPPPLVRLTVVTASSSTENDTPFCIGPPGDNFSSRLLGFAQSMNVNLQINKLDNCPLHTLNAQSVDTSPDEIFVVCAQFRLHQLNHNAPDERSEFLKVLRNMEPKGVILSDNNMGCCCNCCGDFTTGFSRRVEYLWRFLDSTSSAFKGRESDERRVMEGEAAKALTNQRETNEGKEKWCERMKEAGFVGEVFGEDAIDGGRALLRKYDGNWEMKVEDDNTSVGLWWKGQSVSFCSLWKLDGNYKTSTFTS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00068 543 MobiDBLite consensus disorder prediction 120 146 - -
Gma16g00068 543 MobiDBLite consensus disorder prediction 51 86 - -
Gma16g00068 543 ProSiteProfiles GRAS family profile. 148 531 IPR005202 -
Gma16g00068 543 MobiDBLite consensus disorder prediction 51 146 - -
Gma16g00068 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 531 IPR005202 -
Gma16g00068 543 Pfam GRAS domain family 158 531 IPR005202 -
Gma16g00068 543 MobiDBLite consensus disorder prediction 88 102 - -
Gma16g00068 543 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 531 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00068 Gma-Chr16 673936 675902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00068 1 531 GRAS Transcription Factor Family AT3G13840 49.632 1.80e-169 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma16g00068 GRAS 7.1e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00068 - - gmx:100810818 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00370 07 3295093 3297231 Gma16g00068 16 673936 675902 GST
Gma16g00068 16 673936 675902 Gma13g03090 13 45177996 45179358 PCT
Gma16g00068 16 673936 675902 Gma15g00272 15 2349980 2351463 PCT