Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00059 ATGAATTTTAGGTGGTCTTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATCAAGAATTATTGGAACACCAACATTGGGAGGAAACTTCAAAATGGTGGTGCAGGAACCACTTTAAACACACTTCAACAAGAAGATCAAAACGTTAAAGAACAAGAGTGGCACTATGATAAGGGTTCGTGTCTTGTTCAGACAAAAGCAACAAGGTGGACTAAGGTCACAGTCACCAATGAAATTAGTCAACCCAATGAAGGGATTACAATTAAGAGCAATGTTGGTGATAACAAAATGAAGGGTTTTCTAGTGTCTCCATCTAAAGAGAGTAACAATGATTCAGTGTTGTTGGATTTCATGGCAGATTTTGAGATGGATGGAAACTTCTTCTCGGAGCTCCTTAAGATGGATTTGCCCGAATCATCTTGTAAGGAAAATAAGATACTCGGAGATAATGGTAACCCTAGCACGGTTGATAAAGTCTATTTATCTCCAAAATCATCCTGTGATACCGCCCACTTCCCTTGGGGTGATTCATTCTATGATACAAATTTTGATTTTCTACCAGTGACAATTTTTATGGAGTCCGGATTTGATTGGCTCTGA 606 0.3927 MNFRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGGAGTTLNTLQQEDQNVKEQEWHYDKGSCLVQTKATRWTKVTVTNEISQPNEGITIKSNVGDNKMKGFLVSPSKESNNDSVLLDFMADFEMDGNFFSELLKMDLPESSCKENKILGDNGNPSTVDKVYLSPKSSCDTAHFPWGDSFYDTNFDFLPVTIFMESGFDWL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00059 201 Gene3D - 1 60 - -
Gma16g00059 201 CDD SANT 4 28 IPR001005 -
Gma16g00059 201 ProSiteProfiles Myb-like domain profile. 1 28 IPR001005 -
Gma16g00059 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
Gma16g00059 201 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 154 - -
Gma16g00059 201 Pfam Myb-like DNA-binding domain 4 26 IPR001005 -
Gma16g00059 201 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 154 - -
Gma16g00059 201 SUPERFAMILY Homeodomain-like 3 35 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00059 Gma-Chr16 597582 598187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00059 4 82 MYB Transcription Factor Family AT5G35550 40.506 4.98e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma16g00059 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00059 K09422 - gmx:100809225 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00356 07 3189480 3190946 Gma16g00059 16 597582 598187 GST