Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00045 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAACAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTTTCTGTTCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTAACTTCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATATAAGAGCTGCAGGCCATGTTCAGGATCTTCAAATGGTAACAGGAATAGGAAGTATGCAGACTCAGATATTGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAGTGGAAAATGGGGGTAGGGTGAAAGGGCTTTCAAGTGGAGAAGGAACACCAGCATCAGTGAGTGGAAGAACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGACTCAGGGAGGGAATGATCTCAAGAGAATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGCCACTCCTCCACTCAGCAAAGAACGTGCACCCCGACATTTTCACCATCCAACAGGAATGGGCTACTCCTCATCAGATTCACTGGATCGCCACCAAATACAACCACACCCTTGCTATGAAACAAGTGGTCTGACATCGACACCTAATCTTTCCAACATTAGTGCACCAAAGACCGAAAGATCATCCCTTGATGCTTCTGTGAGGACTAGTTCATCTGGAGAAGATCACTCGGGCGAGTTTTCAATCAGCAATGCTAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAATCGTGCTAGGATACAAGAACAATACTTGTGA 1116 0.4731 MLTCIACTKQLNNGSLRQEEEEEAVSVHTPSTKQAIKALTSQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDIGSDSARFNWAYRRTGSSNSTPRMWGKEVENGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLTQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPATPPLSKERAPRHFHHPTGMGYSSSDSLDRHQIQPHPCYETSGLTSTPNLSNISAPKTERSSLDASVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00045 371 Pfam Transcription factor BRX N-terminal domain 26 60 IPR027988 -
Gma16g00045 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Gma16g00045 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Gma16g00045 371 MobiDBLite consensus disorder prediction 203 315 - -
Gma16g00045 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
Gma16g00045 371 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Gma16g00045 371 MobiDBLite consensus disorder prediction 94 126 - -
Gma16g00045 371 MobiDBLite consensus disorder prediction 264 315 - -
Gma16g00045 371 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 371 - -
Gma16g00045 371 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00045 Gma-Chr16 448553 452621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00045 1 371 Major Intrinsic Protein MIP AT1G31880 49.610 1.13e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00045 - - gmx:100801626 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00339 07 3029889 3034283 Gma16g00045 16 448553 452621 GST