Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00039 ATGAGCATGAGTGTGGCAGAGGATGATGAATCTAGTGAAGAGGTTCATGTTCCGGGTGAGATTGATTGGCAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAGCTCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCTCAGTCCCAAGTTTCTTGCATCAACACTGCATTTTCCTTGATTAGGGGTGAGGGTTTTAGAGCATTGTACCGCGGGTTCGGGACTTCTTTGATGGGCACAATCCCTGCTAGGGCTCTTTACATGGCTGCATTAGAGGTTACCAAGAGCAATGTGGGAACTGCCACTGTTAGGTTTGGTCTTGCTGAACCAACTGCTGCTGCAGTTGCCAATGCAGCTGCTGGCTTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCTGTTGATGTCGTGAGCCAGAGGCTGATGGTTCAAGGTGTTTGTGATTCGGGAAATTCTAAGGCTTCAGCTCTTCGGTACATCAACGGGATTGATGCCTTCAGGAAGATCTTGAGCAGTGATGGTCTTAGGGGCTTGTATAGGGGTTTTGGGATATCAATTTTGACCTATGCCCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGGGAAATGATAGTGCACTGAAGCCTGATACAAAGACTGTGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGATACCATCAAGACAAGACTGCAGGTCCTGGATGGTGATGAGAATGGCCGTCGTGGACCCACAGCTATGCAGACAGTGAGGAGTCTGGTTAGGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCTATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGCTCCTCAAACGGCTCTCTGCGAAGAATCAAGAGGTTTTGACATGA 1023 0.4858 MSMSVAEDDESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVSCINTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRFGLAEPTAAAVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGVCDSGNSKASALRYINGIDAFRKILSSDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKGNDSALKPDTKTVMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTAMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYELLKRLSAKNQEVLT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00039 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 337 - -
Gma16g00039 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 219 IPR018108 -
Gma16g00039 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 337 - -
Gma16g00039 340 Pfam Mitochondrial carrier protein 126 220 IPR018108 -
Gma16g00039 340 Pfam Mitochondrial carrier protein 246 335 IPR018108 -
Gma16g00039 340 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Gma16g00039 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
Gma16g00039 340 SUPERFAMILY Mitochondrial carrier 24 328 IPR023395 -
Gma16g00039 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 242 331 IPR018108 -
Gma16g00039 340 Gene3D Mitochondrial carrier domain 30 338 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00039 Gma-Chr16 360841 362745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00039 6 337 Chloroplast and Mitochondria Gene Families AT1G72820 74.780 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00039 K15121 - gmx:100789089 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00335 07 2969938 2970969 Gma16g00039 16 360841 362745 GST