Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00022 ATGGGGGACGAGTCGCCCAGAAACAAAGTGAAGTTCCTATGCAGCTACGGCGGGAAGGTCCTTCCAAGACCCTCCGATGGACTCCTAAGGTATGTTGGAGGCGAGACTCGTGTGGTTTCTGTCCCTCGTGAGATCACATTTCCCGAGCTAATGAAGAAGGTGAGTAGCATGGTGGAGGGAGTCGGAGATATGGTCCTAAAATACCAGCTGATACCAGAAGATCTGGACGCATTGGTGTCGGTGAGAACAGAGGAAGATGTGAAGCACATGATCGAGGAGCACGATCGGCACCATACTGGAGCCTTACTCCGTGCATTCCTCTTTCCCCCTTCCAAGCAAACAGGTTTGGTTGCGTGCGAACCGTATCTGTTGGAGCAGCGCTACATCGACGCCATAAATGGGATCATCCGAGCAAGCCCCAGGAAGGGCTCTGCCTGCTCTTCCCCAAAATCAAACTCCCCCGATGCATCCCCTCGCTTTTCCAATTCAAATTCATTGCATAGAGTCCAAAGCTCTCCTACCCTCACCGACCTTGGTGTGTTTTTGGATCATCAGCATCAAGGCCAACAACAGCAATATCATCACCCTAATTTTCATTTTTCTAGACCCCCCCAGGATCCTCAACGGCTTGGTGGAGGAAGGGTTCCCTCTTTTAACTATCATTACTCAAACATCACCAGACAACTCACCCACAGAGGAGACAGAGGAGGAGGTTACGCCTACTATGATGACTCTCCACCATCCTATGCCCATGATAGAATTCATAGTGTGTCCAGGAGTCCTAGAAGAAAATCTATCTGGGAATGA 807 0.5019 MGDESPRNKVKFLCSYGGKVLPRPSDGLLRYVGGETRVVSVPREITFPELMKKVSSMVEGVGDMVLKYQLIPEDLDALVSVRTEEDVKHMIEEHDRHHTGALLRAFLFPPSKQTGLVACEPYLLEQRYIDAINGIIRASPRKGSACSSPKSNSPDASPRFSNSNSLHRVQSSPTLTDLGVFLDHQHQGQQQQYHHPNFHFSRPPQDPQRLGGGRVPSFNYHYSNITRQLTHRGDRGGGYAYYDDSPPSYAHDRIHSVSRSPRRKSIWE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00022 268 MobiDBLite consensus disorder prediction 231 268 - -
Gma16g00022 268 PANTHER OS05G0427100 PROTEIN-RELATED 4 216 - -
Gma16g00022 268 MobiDBLite consensus disorder prediction 142 169 - -
Gma16g00022 268 SMART PB1_new 24 110 IPR000270 GO:0005515
Gma16g00022 268 CDD PB1_UP2 13 108 - -
Gma16g00022 268 MobiDBLite consensus disorder prediction 144 169 - -
Gma16g00022 268 Gene3D - 30 109 - -
Gma16g00022 268 SUPERFAMILY CAD & PB1 domains 25 113 - -
Gma16g00022 268 Pfam PB1 domain 29 109 IPR000270 GO:0005515
Gma16g00022 268 PANTHER OS05G0427100 PROTEIN 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00022 Gma-Chr16 139787 140672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00022 3 152 MAP Kinase Kinase Kinase AT3G46920 42.593 5.45e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00022 - - gmx:100800353 531.946