Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02593 ATGGCTCAGAAAACCGAGAAAGAAGAAACCGACTTCAAAGTTCCGGAAACGATTACGCTTTGCGTCAACAACTGCGGCGTCACCGGAAACCCTGCCACGAATAACATGTGCCAGAAGTGCTTCACTGCCTCTACCGCCACCACTTCCGGCGCCGGAGGTGCCGGAATAGCTTCTCCGGCGACCAGATCCGGCGTCTCCGCGCGTCCTCAGAAGAGATCTTTTCCTGAAGAGCCCTCGCCGGTGGCGGATCCTCCTTCTTCGGACCAGACGACGCCGTCGGAGGCGAAGCGCGTGGTCAACCGCTGCTCCGGATGCCGGCGGAAGGTCGGACTCACCGGATTCCGGTGCCGGTGCGGCGAGCTCTTCTGCGCCGAGCACCGGTACTCCGACCGCCACGACTGCAGCTATGACTACAAAGCCGCCGGAAGAGAAGCCATCGCGAGGGAGAATCCGGTGATCAGAGCTGCGAAGATCGTCAAAAGTATCGCCAGGTGTTTTCTGCATAAAGGAATTGTTCTGGTGCTCATAAATAAGAACCGCAGAGCACATTGTTGCTGGAATCAATGGCAAGCATATGTCTTCTCTTCTTCTTCTATTCTCGAGCTCGACTTGGTCACGATTCGCCGGAGCGGAAAAAGAGCTTTGAGCCCTGCTGTCGGCAAAATGTCCCTCCCTTACATCTTCGGCATCGGCCTTGCCCTAATCCTTCGCAAGACCGTTGCCGGAATCAACGAATTTGGTTTCTCGCGGTTCCTCATCTTCATGGGAGTCACGATTTCCATCATACCCTTCCCCGTCCTAGCATGCATCCTAACCGAGCTCAAGCTCCTCACTCCTCGCGTCGGCGACACTGCCATGGCCGTCGCAGCGTTCAACGATGTTGATGCATGGATCCTCCTTGCCCTTGCCATTGCACTCGCCGCCGTCGACGTCAACAGCCACATTCACAAGAGCCCCTTCGTCTCGCTACGAGTGCTCCTCTCCAGCATGGCCTTTGTCGCCTTCATGATGATAATAATTTGGCTAGGAGACTTGACCAAACCGGTAGCCGTGACCATATCATGTCCCTTGATATTTTTAAAAACCAAATGTACAACTTAG 1101 0.5504 MAQKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTASTATTSGAGGAGIASPATRSGVSARPQKRSFPEEPSPVADPPSSDQTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKSIARCFLHKGIVLVLINKNRRAHCCWNQWQAYVFSSSSILELDLVTIRRSGKRALSPAVGKMSLPYIFGIGLALILRKTVAGINEFGFSRFLIFMGVTISIIPFPVLACILTELKLLTPRVGDTAMAVAAFNDVDAWILLALAIALAAVDVNSHIHKSPFVSLRVLLSSMAFVAFMMIIIWLGDLTKPVAVTISCPLIFLKTKCTT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02593 366 Gene3D - 78 157 IPR035896 -
Gma15g02593 366 SMART AN1_Zf_4 102 139 IPR000058 GO:0008270
Gma15g02593 366 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Gma15g02593 366 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Gma15g02593 366 Pfam Sodium/hydrogen exchanger family 200 345 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma15g02593 366 MobiDBLite consensus disorder prediction 51 94 - -
Gma15g02593 366 Pfam AN1-like Zinc finger 102 139 IPR000058 GO:0008270
Gma15g02593 366 Gene3D - 1 69 - -
Gma15g02593 366 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Gma15g02593 366 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 160 - -
Gma15g02593 366 SUPERFAMILY AN1-like Zinc finger 87 155 IPR035896 -
Gma15g02593 366 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 160 - -
Gma15g02593 366 Gene3D - 197 359 IPR038770 -
Gma15g02593 366 ProSiteProfiles Zinc finger AN1-type profile. 96 142 IPR000058 GO:0008270
Gma15g02593 366 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02593 Gma-Chr15 54028002 54038579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02593 8 160 C2H2 Transcription Factor Family AT3G52800 37.209 1.99e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02593 - - gmx:102670539 331.257