Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02590 ATGGACAAGGGGGTGCCTCCTAGCCTCTTCGTCAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGATAAAGGGAAGAATGTCAAATTGGAGGATTCTAAACCAATTAAGGTTATTTCAGGGTCTTTGTCTCCCAATCCTTCCTTTACCAAAACGCCTGTGGACTTGAAGGTTAATGACACAAGGAAAATATCCCAGGGTGGTTCCAGTGGAAAGCTAGCTTTCAGTTTAAAACAAAAGTCAAAGCTGGTGCCACCCCCTGTTAAGTTGAGTGCTGATGAGGATGAAGAAGAAACAGAAGCTGGGTATGTTTCAAACGATGCACCACTAAAACGGCAAAAGTTAGGCCAGGAGGAAGGCATTGACCAATCATCAAGACAACTTGATGTTGCACCTCATTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAATTGGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTAACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTGTTTGATGAGAGATGTGCTGAATACAAGTATTATGAATATCGGCTTGCTCAAGAAGAAAATGCTCTTGTGCAATCAAGGGAATCACAGGTGCCTCGTAATGGGGGTACAAGCACTTCATCTTCCAAACAGACTAATGGTCATCAGAGATCATCTCAGCAGCATACATACCAAATTCCTGCATCTGCTTTATATGAAAGTGCTGACAATCCAAGAGCTTCTGGATTTTCAATTCAAACATCATCAGTAGGAAGCAGTGAAGAGCCCAGTGGTTCATCAAATGCTGATTCTTTGGCACTAATGGAGTTCTACATGAAAAAAGCTGCACGGGAAGAGAAGTATAAACAACCTAAGCATTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCTAGGCAAAAAAGGCCATCACATGGGTGATTTCATTCCTCCAGAAGAACTTGAAAAGTTCTTGGCTACCTGTAATGATGCTGCAGCGCAGAAAGCTGCTATGGAGGCCGCAGAGAGGGCTAAGATTCAGGCTGATAATGTAGGCCACAGGCTCCTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGTGGATCCAGGAAGGGTATTGCGGATCCTATCATGGCCGGTAATGTTAAGAAGAATAACCTGGGGGTTGGGGCTCAGGAACCTGGAGAGGTGAGTGCTGAGGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGTTACAGACCCAATCCCCTGAACAATCCTCGCAAGGCTTATTACTGA 1311 0.4424 MDKGVPPSLFVNDGSFMERFKQLQQEQDKGKNVKLEDSKPIKVISGSLSPNPSFTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYVSNDAPLKRQKLGQEEGIDQSSRQLDVAPHSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYRLAQEENALVQSRESQVPRNGGTSTSSSKQTNGHQRSSQQHTYQIPASALYESADNPRASGFSIQTSSVGSSEEPSGSSNADSLALMEFYMKKAAREEKYKQPKHSKDEMPPPASLLGKKGHHMGDFIPPEELEKFLATCNDAAAQKAAMEAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKNNLGVGAQEPGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02590 436 Pfam Surp module 147 197 IPR000061 GO:0003723|GO:0006396
Gma15g02590 436 SUPERFAMILY Surp module (SWAP domain) 132 199 IPR035967 GO:0003723|GO:0006396
Gma15g02590 436 Gene3D Surp module 120 202 IPR035967 GO:0003723|GO:0006396
Gma15g02590 436 MobiDBLite consensus disorder prediction 202 275 - -
Gma15g02590 436 MobiDBLite consensus disorder prediction 251 275 - -
Gma15g02590 436 ProSiteProfiles SURP motif repeat profile. 148 191 IPR000061 GO:0003723|GO:0006396
Gma15g02590 436 Pfam G-patch domain 354 397 IPR000467 GO:0003676
Gma15g02590 436 SMART surpneu2 146 200 IPR000061 GO:0003723|GO:0006396
Gma15g02590 436 MobiDBLite consensus disorder prediction 202 242 - -
Gma15g02590 436 SMART G-patch_5 351 398 IPR000467 GO:0003676
Gma15g02590 436 MobiDBLite consensus disorder prediction 67 81 - -
Gma15g02590 436 ProSiteProfiles G-patch domain profile. 353 400 IPR000467 GO:0003676
Gma15g02590 436 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 436 - -
Gma15g02590 436 MobiDBLite consensus disorder prediction 65 145 - -
Gma15g02590 436 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 436 IPR040169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02590 Gma-Chr15 53998702 54003849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02590 327 409 C2H2 Transcription Factor Family AT5G26610 39.773 4.22e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02590 K13096 - gmx:100786213 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02590 15 53998702 54003849 Gma08g01406 08 11991908 11998951 GST