Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02589 ATGAGTGTTATGTATAGTCCTGTTCTCAATTACTCAGATGTGGAGTATCAGCTATGGAAAAACCAAGACATGGATTCAAGTATTGGACATCCACAACAACACTGTCACCAATCCAATTCTGGACTATTGAGGTACTGTTCTGCTCCAAGCTCAATGCTGGCAAGCCTTATTGACAACACCATTCATGGCTGTGTCAATGAGGAACCATTCACAAGTGAGAATCAGCAGCAGCAGCAGCATTATCTTCCATCCACGAGTTCAGAAATGGAGACCATGTTGTCCAAAATGCCACCATCCAACATTGGATGGAGTAACTCAGAACCTTTGCAAGAATTTGGAGGCAAGCCTGTGAAGCAGGAAATAGGGCAATCTGTTCCACAAGGACCACCAAAGCAGAATGGTTATTCTTATGGTGGCTCTCAGTTAATTTACCAATCTCAGCAAATTCAAGGCTTGCCAAATGGTTCTTCCATTGCTTCTATCAGTGCTTTTGATGGCTCTTTTGGTGCGGTGAACTCCATGGCTTCAGAGGACTCCATTCAATCTAAAATGGGTGTCAGGAATTGCTCCAATCTCTTTAGGCAAAAGAGCTCCCCTGCTGGATTTTTCTCCATTGAAAATGATCTTGCGGCATTGAGAGAAGTAGGAAGCTTTAAAGACAATGATGTTTCAAATGGACAAGCCACCGCATCAACTAGTGGGTTGCATAGTTCTCTTACTTTCTCATCGAGATCATCTTCATGCTTGAAACAGATGCCACCACAAATAGCTGAAAATGGAAATGAAAGCCTAGAAGAAAATTATGATCAAAGTAGAAACCTAGTAAATGACAACGGTAGCTCAAAATGTTACATACCTAGCTTCACCAATGAATTCTGGGAAAGTTCTGCATTCAATGCCCCCAAAACAGAAAATGAAGATGAAATCATGTTTTCCACTTCAAATGGTTTGGAATCTCAGGAAACAGATTTCAGCTATCAAAATCATGGTTTGACTCACCATTTGAGTCTACCTAGCTCTTCTACTAAGATGTCATCCATAGAGATGTTTCTTCAAATTCAAGGTTCTGTTCCTTATAAAATTCGAGCCAAAAGAGGCTTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGAGAGAAGAACAAGAATTAGTGAAAGAATCAAGAAACTGCAAGACCTTTTTCCAAGATCAGAAAAGCCAACAAGCACAGCAGATATGTTAGATTTGGCAGTTGAGCACATTAAGGACCTGCAACAACAAGTTCAGATACTCTCCGATCGTAAGGCAAAGTGCAAATGTACCAGGAATGAGAAGCATTACACTAGAACTTGTGCCTGA 1338 0.4118 MSVMYSPVLNYSDVEYQLWKNQDMDSSIGHPQQHCHQSNSGLLRYCSAPSSMLASLIDNTIHGCVNEEPFTSENQQQQQHYLPSTSSEMETMLSKMPPSNIGWSNSEPLQEFGGKPVKQEIGQSVPQGPPKQNGYSYGGSQLIYQSQQIQGLPNGSSIASISAFDGSFGAVNSMASEDSIQSKMGVRNCSNLFRQKSSPAGFFSIENDLAALREVGSFKDNDVSNGQATASTSGLHSSLTFSSRSSSCLKQMPPQIAENGNESLEENYDQSRNLVNDNGSSKCYIPSFTNEFWESSAFNAPKTENEDEIMFSTSNGLESQETDFSYQNHGLTHHLSLPSSSTKMSSIEMFLQIQGSVPYKIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQVQILSDRKAKCKCTRNEKHYTRTCA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02589 445 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 367 417 IPR011598 GO:0046983
Gma15g02589 445 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 370 433 IPR036638 GO:0046983
Gma15g02589 445 CDD bHLH_AtbHLH_like 372 425 IPR045239 -
Gma15g02589 445 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 31 436 - -
Gma15g02589 445 Gene3D - 369 440 IPR036638 GO:0046983
Gma15g02589 445 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 436 - -
Gma15g02589 445 Pfam Helix-loop-helix DNA-binding domain 373 418 IPR011598 GO:0046983
Gma15g02589 445 Coils Coil 407 434 - -
Gma15g02589 445 SMART finulus 373 423 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02589 Gma-Chr15 53984184 53987264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02589 30 434 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 32.944 1.56e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g02589 HLH 2.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02589 - - gmx:100785696 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02589 15 53984184 53987264 Gma08g01405 08 11979177 11982363 GST