Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02581 ATGGAGTATATACATGCACAAGGGATCATTCATAGAGACCTTAAACCGGAGAATGTACTTGTTGATGGGGAAATTCGCCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGCTTCGAAGTGTGACTCCTTGAGGGGTACGTACCGTTGGATGGCGCCAGAGATGATCAAAGGCAAACGCTATGGGAGAAAGGTTGATGTGTACAGTTTTGGGCTTATCTTGTGGGAGTTGGTGAGTGGAACAGTACCATTTGAGGGCTTGAGTCCAATCCAGGTTGCTGTTGCTGTTGCAGATAGGAATTCAAGGCCAATTATTCCTTCACATTGCCCACATGTTTTGAGTGGTTTGATAAAGCAGTGTTGGGAATTGAAACCAGAGAAGAGGCCTGAGTTCTGCCAGATTGTTCGAGTTTTGGAGCAATTAGATCAAGGCTGCAGCTTCTTGCCCCCCAAGAAACTCAAGCAACACCCTCTTTCATTACGAAAATGGATTAATGGACTTCACTCATTACTGGATTCTCAATCAATGGACAAGGAAGAGATTCCTTCTTCTTGTTCAAAGAGATGTTATGCACCCAAATTAAGCCCAATTGTTTTGCCTTTGCTAGTGTCATTAGTGCCTGTGTGGGGAAAAATGGGGCACTTCAACATTGTTCAACTCTTCATGCTCATCAGCCTTGCAGTTCTCCTTCAAGGAAGACAAGTGCAGTCTGTTGTTATTAAAATGGGTTCAGAAAGGAATGTGTTTGTGGCCAGTGCTTTGATTGATATGTATTCAAAGGGTGGTGATATTGACGAGGCTCAATGTGTGTTAGATCAGACTTCTAAGAAGAATAATGTGTTGTGGACATCCATGATCATGGGTTATGCTCAATGTGGGGGAAGTTCAGAGGCTGTGGAACTTTTTGATTGTCTATTGACCAAGCAAGAGTTTATTCCTGATCATAATATCTGCTTTACTGCTGTCTTAACAGCTTGTAATCATGCAGGATTTCTTGACAAAGGGGTGGAATACTTCAACAAAATGACAACAAATTATGGCCTGTCTCCTGATATAGATCAACATGCTTGCTTGATCTTTATGCAAGAAACGGAAATTTAA 1101 0.4196 MEYIHAQGIIHRDLKPENVLVDGEIRLKIADFGIACEASKCDSLRGTYRWMAPEMIKGKRYGRKVDVYSFGLILWELVSGTVPFEGLSPIQVAVAVADRNSRPIIPSHCPHVLSGLIKQCWELKPEKRPEFCQIVRVLEQLDQGCSFLPPKKLKQHPLSLRKWINGLHSLLDSQSMDKEEIPSSCSKRCYAPKLSPIVLPLLVSLVPVWGKMGHFNIVQLFMLISLAVLLQGRQVQSVVIKMGSERNVFVASALIDMYSKGGDIDEAQCVLDQTSKKNNVLWTSMIMGYAQCGGSSEAVELFDCLLTKQEFIPDHNICFTAVLTACNHAGFLDKGVEYFNKMTTNYGLSPDIDQHACLIFMQETEI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02581 366 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 143 - -
Gma15g02581 366 Pfam Protein tyrosine and serine/threonine kinase 1 138 IPR001245 GO:0004672|GO:0006468
Gma15g02581 366 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 313 IPR002885 -
Gma15g02581 366 TIGRFAM PPR: pentatricopeptide repeat domain 317 352 IPR002885 -
Gma15g02581 366 Pfam PPR repeat 280 306 IPR002885 -
Gma15g02581 366 Pfam PPR repeat 252 273 IPR002885 -
Gma15g02581 366 Pfam PPR repeat 318 343 IPR002885 -
Gma15g02581 366 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Gma15g02581 366 Gene3D Tetratricopeptide repeat domain 208 358 IPR011990 GO:0005515
Gma15g02581 366 PANTHER SERINE-THREONINE PROTEIN KINASE 1 143 - -
Gma15g02581 366 SUPERFAMILY Protein kinase-like (PK-like) 1 138 IPR011009 -
Gma15g02581 366 PRINTS Tyrosine kinase catalytic domain signature 109 131 IPR001245 GO:0004672|GO:0006468
Gma15g02581 366 PRINTS Tyrosine kinase catalytic domain signature 3 21 IPR001245 GO:0004672|GO:0006468
Gma15g02581 366 PRINTS Tyrosine kinase catalytic domain signature 65 87 IPR001245 GO:0004672|GO:0006468
Gma15g02581 366 PRINTS Tyrosine kinase catalytic domain signature 46 56 IPR001245 GO:0004672|GO:0006468
Gma15g02581 366 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02581 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Gma15g02581 366 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02581 Gma-Chr15 53908606 53911146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02581 1 167 MAP Kinase Kinase Kinase AT5G58950 57.955 1.49e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma15g02581 PK_Tyr_Ser-Thr 2.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02581 - - gmx:100784279 341.658