Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02565 ATGGAGCTTGGTTTGAGCTTAGGAGACTCTTCAAGGCCTTTGCTTGGTTTCATGGAAAAGCCTCGTGAAGCCTCCAACCAACTTGGTTTAGGCTTCAACACAACGTTATCAATTGGTCCAATCATTACTACACATAAAGATCATCAACAAGATGAAGATGAAGAATACCAAGAAGAAGAAGAAGAAGAAACAAAGCCAAAGAACAACAACACTCACAGAATACAAGGTCCTGATGGCCTTTCTTCCAATCCCAACAACAACAACAATACAGTTCTGCATCAACTTGATCTTCTCCCTCAACTCGCTCTCCCATGGCACCCTCCTTCTGAAAACGGAAGTTTATCATCTGAGTTGGGAGGCTCTTCTCGGGGCTTGGACGTGAACGCGCAGCCGCCGGCGGTGGAGGACGAGGCGGAGGAAGCGGCGGCGCTGTCGTCGTCTCCGAACAGCGCCGCCTCATCATTTCAAATGGATCTCTGCATATACAGCAGCAGAGGAGGGAGCTCCTATAAGAGGGACTTTGAGGGTGAGGCTTATGATCAAAGGACCTCTTCAAGGGCCAGTGACGATGACGACAATAATAATGGTAGTGGTGGTAATACTAGGAAAAAACTCAGACTCTCCAAGGAACAATCTGCATTCCTTGAAGAGAGTTTCAAGGAACACAACACTCTTAATCCTAAACAAAAGCTTGCTCTTGCTAAACAACTCAATCTTCAACCTCGTCAAGTAGAAGTCTGGTTCCAGAATCGTCGAGCAAGGACTAAGTTGAAGCAAACAGAAGTGGATTGTGAGTACTTGAAGAGATGTTGTGAGACACTAACAGAAGAGAATAGAAGACTTCACAAGGAGCTTCAGGAATTGAGGGCTTTGAAGACTTCAAACCCCTTCTACATGCAATTACCAGCCACAACTTTGACCATGTGCCCTTCTTGTGAGCGCGTGGCCACAAATTCTACATCCACTTCCTTATCTATTAGTGCCACCATCAATGCTACAAATTCAGGAGCCATGGCCAGTGTCAAAACAAGTAATAACAATAACAACAATGACTCACCCTCCAAAGCCATTGGATTCCCCTTTGGAAAACCGAGGTTTCACCCATTTGTTCACACTAGCCAACAACCCCATCAACACCAATCCACAGCATCTTGA 1155 0.4563 MELGLSLGDSSRPLLGFMEKPREASNQLGLGFNTTLSIGPIITTHKDHQQDEDEEYQEEEEEETKPKNNNTHRIQGPDGLSSNPNNNNNTVLHQLDLLPQLALPWHPPSENGSLSSELGGSSRGLDVNAQPPAVEDEAEEAAALSSSPNSAASSFQMDLCIYSSRGGSSYKRDFEGEAYDQRTSSRASDDDDNNNGSGGNTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLQPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFYMQLPATTLTMCPSCERVATNSTSTSLSISATINATNSGAMASVKTSNNNNNNDSPSKAIGFPFGKPRFHPFVHTSQQPHQHQSTAS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02565 384 Coils Coil 271 294 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 109 123 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 341 384 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 171 206 - -
Gma15g02565 384 CDD homeodomain 202 259 IPR001356 GO:0003677
Gma15g02565 384 Pfam Homeodomain 202 256 IPR001356 GO:0003677
Gma15g02565 384 ProSitePatterns 'Homeobox' domain signature. 233 256 IPR017970 GO:0000981|GO:0006355
Gma15g02565 384 MobiDBLite consensus disorder prediction 171 189 - -
Gma15g02565 384 SMART HOX_1 200 262 IPR001356 GO:0003677
Gma15g02565 384 SUPERFAMILY Homeodomain-like 187 259 IPR009057 -
Gma15g02565 384 PANTHER - 89 377 - -
Gma15g02565 384 Pfam Homeobox associated leucine zipper 258 292 IPR003106 GO:0006355|GO:0043565
Gma15g02565 384 MobiDBLite consensus disorder prediction 70 90 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 45 90 - -
Gma15g02565 384 ProSiteProfiles 'Homeobox' domain profile. 198 258 IPR001356 GO:0003677
Gma15g02565 384 Gene3D - 206 256 - -
Gma15g02565 384 SMART halz 258 301 IPR003106 GO:0006355|GO:0043565
Gma15g02565 384 PANTHER PROTEIN, PUTATIVE-RELATED 89 377 - -
Gma15g02565 384 CDD bZIP 251 290 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 341 355 - -
Gma15g02565 384 MobiDBLite consensus disorder prediction 103 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02565 Gma-Chr15 53659716 53662716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02565 123 314 Homeobox Transcription Factor Family AT3G60390 59.091 5.45e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma15g02565 Homeodomain 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02565 K09338 - gmx:100778742 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02565 15 53659716 53662716 Gma08g01373 08 11641261 11643743 GST