Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02542 ATGACATCAAATCCTGTCAAGATGCCTGATTTACCTGAGACACAGATGGAGCACAAGTTATCAGAAGCGGCACACCCTAGTGCTCATAGTAGTAGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAAGCAAAAGACACGAGCACAACAACTGTCCACTACTCAGGAAATGAAACTGGACATATGGACCAGGCTTCCAAAACTGAAGCAAATTTGGAAGGTAAATCCAGACCCCAGAACTTACTGCCACCAAACAGGAACTTATCTGACTTCAACCCTCAACAACACCAAAGTCCAAGCACAAAGAAGCCTAATTCAAATTCTGATCATCATGCAAAGGCAATGTCTGTGTCTACCCCTCAAACAAAGACCAGTACCAATCAAGGTCAAGGGAGTGGTGCTAGTTCTCGGAGTGATAGCTTAGAGAGCACAAGTGCACCTATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGGTTGGCTCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGAGACATTGGGAGTGTGTACCTTGTGGAACTTAAGGGAACTAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGATCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTAAGACAAAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTGTTGTTAGCTCTCGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATAATGCTCTCAGATTTTGATTTATCCCTTCGCTGTTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCACGCAGGCAACAGTAGTAGCAGTGGCAACAATGATGTTGGAGGCATATTAACTGATGACCAAGCAGCGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGTGGAGGACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCAATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCTTGGAACGACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAAGTCAGTGCTGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTTTAGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGCTATAGATTTCTCCAAGTATGCTAGCAAAGACACAGCAACCCCGGCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGATTTTGAGTATTTTTAG 1731 0.446 MTSNPVKMPDLPETQMEHKLSEAAHPSAHSSSANSGNNSPTHPKNVNQEAKDTSTTTVHYSGNETGHMDQASKTEANLEGKSRPQNLLPPNRNLSDFNPQQHQSPSTKKPNSNSDHHAKAMSVSTPQTKTSTNQGQGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMISRVGSLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLIMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHAGNSSSSGNNDVGGILTDDQAAQSTTQVSSFFPRILPSKKNRKAKSDFGLLVGGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLLGTTPFKGSGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEAIDFSKYASKDTATPADKKMADIANDKHSNSATDSYIDFEYF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02542 576 CDD STKc_phototropin_like 179 537 - -
Gma15g02542 576 Gene3D Phosphorylase Kinase; domain 1 179 264 - -
Gma15g02542 576 Gene3D Transferase(Phosphotransferase) domain 1 265 334 - -
Gma15g02542 576 SUPERFAMILY Protein kinase-like (PK-like) 178 539 IPR011009 -
Gma15g02542 576 MobiDBLite consensus disorder prediction 1 158 - -
Gma15g02542 576 SMART serkin_6 181 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02542 576 MobiDBLite consensus disorder prediction 25 153 - -
Gma15g02542 576 ProSiteProfiles Protein kinase domain profile. 181 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02542 576 MobiDBLite consensus disorder prediction 340 360 - -
Gma15g02542 576 Pfam Protein kinase domain 182 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02542 576 Pfam Protein kinase domain 410 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02542 576 Gene3D Transferase(Phosphotransferase) domain 1 410 534 - -
Gma15g02542 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Gma15g02542 576 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 34 576 - -
Gma15g02542 576 PANTHER FLIPPASE KINASE 1-RELATED 34 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02542 Gma-Chr15 53375029 53378037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02542 147 576 AGC Kinase Gene Family AT1G79250 72.991 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma15g02542 Pkinase 6.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02542 - - gmx:100819001 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02542 15 53375029 53378037 Gma08g01470 08 12684837 12688239 GST
Gma15g02542 15 53375029 53378037 Gma08g02140 08 19601316 19603967 PCT