Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02501 ATGGTCATGGAAACAAGTAGAGTGAAAAAGAATGTCGGGATACTTCTCCTCTACCTCACTTTGGCTGCTATTTCTCTCACTCATTGTGATGCAGATAAATCAATGAGACTATTGAGAGGCCCTAAACATAGAAGAAATACAACCAACAAGAACCCAAAGAAGTTGAAAACGGTTAAGCATTTTGATGAGAACCCAACCATATTATCATCAAATGTACAACCCTATAGTCTCAGCTCCCCATTTTCTTTGCCCCCTTATGAATCACTTGCTCCAATCCCATTGCCAGAAAACAGCCCTCCATTTTGTGTGTTTCCACCACCAGGTACTCCTTCCACCACCATTCCCACACCTACAGGCTTTCAACCAACCACACCATCACCTCCATACTATGACACCTCACCAGTCTTTCCAGGCCCTCCAAGCCCACCAGTGTCCTTTCCCACACCAACCCCAGAAACTGTTCCAggcccacccagcatcacgccgggctcgcccgaacccgtgctcaaccctcccatcattattccaagcccacctgactcctccatgggcccacccaggatcacaccaggatcgccggagcccatactcaatcctcccatcattattccaagcccacctgactcctcaatgggcccacccTACTTTGAGCCCACCCCACCACTCATAATCCCTTCCCCCACAGGTGGCATCACCCCAGGCCCACCATCCCCCACTGAAGGCACTGTGCCAAGCCCAAGCGTGTTTCAGCCACCTGTGGTGTACCCTCCACCAAGTGTGCCACCACCACCCAACTATGCCCCTAGGACCACCTTGTGGTGTGTGGCTAAGCCCTCAGTCCCAGACCCAATCATCCAAGAGGCCATGAACTATGCTTGTTGGTCAGGAGCGGATTGCACCTCAATTCAGCCCAATGGGCCATGCTATGAGCCCAACACTGTGTATGCACATGCATCATACGCTTTCAATAGCTATTGGCAAAGGACTAAAGGGGCTGGTGGCAATTGTGAATTTGGAGGCACAGCCATGCTGGTTGCAGTTGATCCTAGCTTTGATGGGTGCTACTTCATCTACAACTGA 1080 0.412 MVMETSRVKKNVGILLLYLTLAAISLTHCDADKSMRLLRGPKHRRNTTNKNPKKLKTVKHFDENPTILSSNVQPYSLSSPFSLPPYESLAPIPLPENSPPFCVFPPPGTPSTTIPTPTGFQPTTPSPPYYDTSPVFPGPPSPPVSFPTPTPETVPGPPSITPGSPEPVLNPPIIIPSPPDSSMGPPRITPGSPEPILNPPIIIPSPPDSSMGPPYFEPTPPLIIPSPTGGITPGPPSPTEGTVPSPSVFQPPVVYPPPSVPPPPNYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYEPNTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGCYFIYN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02501 359 MobiDBLite consensus disorder prediction 227 242 - -
Gma15g02501 359 Pfam X8 domain 272 343 IPR012946 -
Gma15g02501 359 MobiDBLite consensus disorder prediction 120 194 - -
Gma15g02501 359 MobiDBLite consensus disorder prediction 107 194 - -
Gma15g02501 359 PANTHER EXTENSIN-LIKE 144 358 - -
Gma15g02501 359 Gene3D - 268 354 - -
Gma15g02501 359 PANTHER BETA-1,3 GLUCANASE 144 358 IPR044788 -
Gma15g02501 359 PRINTS Proline rich extensin signature 77 93 - -
Gma15g02501 359 PRINTS Proline rich extensin signature 106 127 - -
Gma15g02501 359 PRINTS Proline rich extensin signature 136 152 - -
Gma15g02501 359 PRINTS Proline rich extensin signature 154 171 - -
Gma15g02501 359 PRINTS Proline rich extensin signature 174 199 - -
Gma15g02501 359 SMART X8_cls 272 356 IPR012946 -
Gma15g02501 359 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02501 Gma-Chr15 52652042 52653794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02501 270 356 Glycoside Hydrolase AT3G13560 46.591 1.21e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02501 - - gmx:102664721 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02501 15 52652042 52653794 Gma15g02501 15 52652042 52653794 ECH
Gma15g02501 15 52652042 52653794 Gma08g01508 08 13208495 13210204 GST