Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02493 ATGGCCTCAGCCGCAGCCCCCACAACTTTCTCTCTCCTCCACTCCACCACCCCGGCCTCCTCCTCCTCCGCCACCTCCGCCTCCCCCTCGCGCGTGCAGCTCTCCTCCTCCCTCCGCTCGCGCCCGCTCGCGCGCCGCCTTGGCTTCGCCGCAGCGGACCCGCTGCTCGCGGCGAATGTCGCAGCGCGCGTCGCAGCGGTGAGAGGAGGAAAGGGCGCGAGGGGGGTGGTGTCGATGGCGAAGAAGAGCGTGGGGGAGCTGAGCGCGGCGGACCTGAAGGGGAAGAAGGTCTTCGTCAGGGCCGACCTCAACGTCCCGCTCGACGACAACCAGAACATCACCGACGACACCAGAATTCGCGCCGCCATTCCCACCATCAAACACCTAATCCAAAACGGCGCCAAAGTTATTCTCTCCAGCCACTTGGGGAGGCCGAAGGGTGTCACTCCCAAATACAGCTTGGCACCTCTTGTGCCCCGGCTTTCTGAGCTCATTGGTATCCAGGTTGTCAAGGCTGAAGACAGTATTGGTCCAGAAGTAGAAAAGTTGGTGGCTTCTCTTCCAGATGGAGGTGTTCTTCTTCTAGAAAATGTGAGGTTTTACAAGGAGGAAGAAAAGAATGATCCCGAGCATGCAAAAAAGCTTGCCTCTCTGGCAGATCTGTTTGTGAATGATGCATTTGGTACTGCTCACAGGGCACATGCATCAACAGAGGGTGTTACTAAATACCTGAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGATTACCTTGTTGGGGCGGTATCAAGCCCCAAAAGGCCATTTGCTGCCATTGTTGGTGGTTCCAAGGTCTCATCTAAAATTGGAGTGATTGAGTCACTTTTGGAAAAAGTTGACATTCTTCTTCTTGGTGGAGGAATGATCTTCACATTTTACAAGGCACAAGGTCTTTCAGTGGGTTCATCCCTTGTAGAAGAAGATAAGTTGGATCTTGCTACATCACTACTTGCAAAAGCCAAGGAAAAGGGGGTGTCTCTCTTGTTACCAAGTGATGTGGTGATTGCAGACAAATTTGCCCCCGATGCAAACAGCAAGGTCGTGCCAGCATCTGCCATCCCTGATGGCTGGATGGGATTGGATATTGGTCCAGATTCTGTTAAATCATTCAGTGAAGCATTGGATACTACCCAAACCATCATATGGAATGGACCAATGGGAGTGTTTGAGTTTGACAAGTTTGCTGTTGGTACAGAGGCTATTGCAAAGAAGCTGGCTGATCTCAGTGGAAAGGGGGTGACCACAATTATCGGAGGAGGAGATTCTGTTGCAGCTGTGGAGAAAGTAGGAGTTGCTAGTGTCATGAGCCACATATCTACTGGTGGTGGTGCCAGTTTGGAGTTATTGGAAGGCAAAGAGCTTCCAGGAGTCCTTGCTCTCGATGAAGCCGTCCCAGTTGCCGTGCGGTCCAAGCTGTAG 1464 0.5246 MASAAAPTTFSLLHSTTPASSSSATSASPSRVQLSSSLRSRPLARRLGFAAADPLLAANVAARVAAVRGGKGARGVVSMAKKSVGELSAADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELIGIQVVKAEDSIGPEVEKLVASLPDGGVLLLENVRFYKEEEKNDPEHAKKLASLADLFVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSVKSFSEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAVRSKL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02493 487 ProSitePatterns Phosphoglycerate kinase signature. 96 106 IPR015911 GO:0004618|GO:0006096
Gma15g02493 487 MobiDBLite consensus disorder prediction 1 37 - -
Gma15g02493 487 Hamap Phosphoglycerate kinase [pgk]. 86 477 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 Gene3D - 152 478 IPR015824 GO:0004618|GO:0006096
Gma15g02493 487 Gene3D - 50 150 IPR015824 GO:0004618|GO:0006096
Gma15g02493 487 CDD Phosphoglycerate_kinase 90 477 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 SUPERFAMILY Phosphoglycerate kinase 87 477 IPR036043 GO:0004618|GO:0006096
Gma15g02493 487 Pfam Phosphoglycerate kinase 89 467 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PANTHER PHOSPHOGLYCERATE KINASE 1 478 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PANTHER PHOSPHOGLYCERATE KINASE 1 478 - -
Gma15g02493 487 Gene3D - 266 453 IPR015824 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 91 107 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 113 135 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 190 205 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 218 240 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 249 271 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 272 291 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 394 419 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 430 441 IPR001576 GO:0004618|GO:0006096
Gma15g02493 487 PRINTS Phosphoglycerate kinase family signature 453 470 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02493 Gma-Chr15 52487551 52491863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02493 K00927 - gmx:100801951 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02493 15 52487551 52491863 Gma15g02493 15 52487551 52491863 ECH