Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02482 ATGATGGCACTGAGCACGTACTCCAACTTTGACACTACTCTTCAAATTCCCCACTTAGAAACAAACACTTTCCATGAAGCCATACCAGAAGTAGCAGCACCAAACCTCCAACATTTTCTTCCACACTCAGATGAAAGCCTCTTCCTTTCAAACGCGCTTTTTGAGAACTACATTGACCCAACTTGTGATTTTCTCTATACTCCCGAGATCAATCCCTTCACTTCACTCACTCATCATGATGACATTTTCCCAACTCATGAAGATTACAATCTTCTCCCATGCCCTAAACGCCAAAAGTGCTGCTACGAGAAAAACCAACAACAAGAACACGTGTTCTTTTCACTGCAAGAGCTTACTACATCAACACTTCCATCCAATTTCCTAGACAGGTATGCTGTGCCTTATGATAATAACTTCTCCTTCCAAGCAGAGGAACTCCAACAACAACTCTACGAGGTTCCACAATATGGTAGTACTTGTGTGGATCTTCAATGTGAGAAGAAAGGTTGCGAGAGAATCATATCTCCCCAGAGCGTAGCGGCAAGAGAAAGGAGAAGAAAGATCACTGAGAAAACTCAACAGCTTGGGAACTTGATTCCTGGTGGACCAAAGATGAACACAGCAGAGATGCTTCATGCAGCTGCGAAGTATGTTAAGTTCCTTCAAGCCCAAGTTGGAATGCTTGAACTCATGAACACATCCGAGGAATATAAAGCTGAATCTCATCCTGAAAATCTACATGCTCTAGTTGTTTCTCCCTTTGTTCAAGAGAAGCTGTACACGGAGGAAAGGTGCTTTGTGCCAAAAGAAATTGTCACCACTTTGGcaaatcatgaggatcttcaatcaagacctaccatccttgaggatcttaaacagctgattgggacagacattgagaagaaagCAAAGAAAGAATAA 921 0.3876 MMALSTYSNFDTTLQIPHLETNTFHEAIPEVAAPNLQHFLPHSDESLFLSNALFENYIDPTCDFLYTPEINPFTSLTHHDDIFPTHEDYNLLPCPKRQKCCYEKNQQQEHVFFSLQELTTSTLPSNFLDRYAVPYDNNFSFQAEELQQQLYEVPQYGSTCVDLQCEKKGCERIISPQSVAARERRRKITEKTQQLGNLIPGGPKMNTAEMLHAAAKYVKFLQAQVGMLELMNTSEEYKAESHPENLHALVVSPFVQEKLYTEERCFVPKEIVTTLANHEDLQSRPTILEDLKQLIGTDIEKKAKKE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02482 306 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 2 291 - -
Gma15g02482 306 Pfam Helix-loop-helix DNA-binding domain 182 222 IPR011598 GO:0046983
Gma15g02482 306 SMART finulus 178 227 IPR011598 GO:0046983
Gma15g02482 306 Gene3D - 175 244 IPR036638 GO:0046983
Gma15g02482 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Gma15g02482 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 233 IPR036638 GO:0046983
Gma15g02482 306 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02482 Gma-Chr15 52363761 52365588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02482 67 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 36.777 8.47e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g02482 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02482 - - gmx:102667124 622.468