Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02473 ATGGGGAAAGGAAGAGCACCATGCTGTGATAAGACTCAAGTGAAGAGAGGTCCTTGGAGCCCTGCAGAAGACCTTAAGCTCATAGCCTTCATCCAGAAATATGGCCACGAAAACTGGCGTGCTCTCCCAAAACAAGCAGGGCTCCTGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTAAGGCCTGATGTGAAGAGAGGCAATTTTACACCAGAGGAAGAGGAAACCATAATAAGGCTACACAAGGCCTTAGGAAACAAGTGGTCAAAGATTGCATCAGGTTTGCCTGGTAGGACTGACAATGAGATCAAGAATGTGTGGAACACCCACTTGAAGAAAAGATTGGCTCCAAAAAAAGTCTCAGAATCAAGTGCTGATGAATCCAAGCCAGAATCATCAATCACTTCCTCCTCTTCCTCATCATCTGAATCATTTTTCTCCAATGAGAGACCAAATTCACCAAAGACCACCACACCTAGTAACAATGAATTCAATGACCAAGCTGAGAAATTATCAGTGGAAGATAAAATGGACAAGGATTCAGAAAAACAACTGTCCAACGAACTTGTTAACATCACTGAGGATCCAAAAGAGTCATCAGTTTCATTGTCTTCTGTTGAATCAAACATTGTAAACACAAGCCAGATTGTTGAACACAAACCAGAAGAAGAACAATTGGCCTCTCCATTACCCTACTTAGGACATTATGATGTTGGAAGCATATTAGAAGAGGTGGATAAACCAAACCACCTGATTGAAATTCCATGGGAGCCAGATTATGATTTTTGGAAGTTGTTAGATGATGATAATAGCCTTGGATCTTTTCAATCAAATGAAGTCCAATTAGGTGAGTTCCCAGCCATCCAAAACATCATTCTTGGAGAAGAGGGTGTTCATGATGCTGAAGCCAAGAAGTGGTCCCATGATTTTGAAAATGAGTTTGGAGTAGTTGGTGGGATAAAGGAGTCAAGCAAGGATCATTTCCTACCAAAGAACTATGCTGTTGAGCCAGAAATGGACCACACTCAAGCATTTGATTTTGATGACATTGACATGGCAAGGCCAGAATCTGAATTAGACTTTGGTTATATCCAATTATGGCCCTCTTGCCCTCAAAATAATAATACTAGTCTTTAG 1146 0.411 MGKGRAPCCDKTQVKRGPWSPAEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTPEEEETIIRLHKALGNKWSKIASGLPGRTDNEIKNVWNTHLKKRLAPKKVSESSADESKPESSITSSSSSSSESFFSNERPNSPKTTTPSNNEFNDQAEKLSVEDKMDKDSEKQLSNELVNITEDPKESSVSLSSVESNIVNTSQIVEHKPEEEQLASPLPYLGHYDVGSILEEVDKPNHLIEIPWEPDYDFWKLLDDDNSLGSFQSNEVQLGEFPAIQNIILGEEGVHDAEAKKWSHDFENEFGVVGGIKESSKDHFLPKNYAVEPEMDHTQAFDFDDIDMARPESELDFGYIQLWPSCPQNNNTSL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02473 381 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Gma15g02473 381 Gene3D - 70 142 - -
Gma15g02473 381 Gene3D - 16 68 - -
Gma15g02473 381 PANTHER - 1 321 - -
Gma15g02473 381 SMART sant 15 65 IPR001005 -
Gma15g02473 381 SMART sant 68 116 IPR001005 -
Gma15g02473 381 MobiDBLite consensus disorder prediction 118 168 - -
Gma15g02473 381 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Gma15g02473 381 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Gma15g02473 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 321 - -
Gma15g02473 381 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Gma15g02473 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Gma15g02473 381 MobiDBLite consensus disorder prediction 130 168 - -
Gma15g02473 381 CDD SANT 71 114 IPR001005 -
Gma15g02473 381 CDD SANT 18 63 IPR001005 -
Gma15g02473 381 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Gma15g02473 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02473 Gma-Chr15 52228649 52231496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02473 1 319 MYB Transcription Factor Family AT1G79180 45.170 2.73e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma15g02473 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02473 K09422 - gmx:100101836 766.533