Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02467 ATGGCGGCGCCGAACAGGATCGAACGCGCCCACCAGATGTACCGCGACGGAAGTTACGAGGAGGCGTTAGGGTTCTACACGGAAGCAATCGCCTTGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAACCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTTACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAGCAGACTTTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGTTTGAAGACGCAATTGGCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTCAAGAACAGGAAGATGAGGAACCTGAGGTGATATCACAAGGAGAAAATGAAAATGAAGAGATGGGAGAGAAATATTCATCGATTTCTAATATTAGGACAGATCAAAAGGTTGAGCTTGGCAAAGGTATTATTATTGCTGATTGTGCTCCCCATGAAACAGACCTCAAATTTTCATCCAAGCAAGGAAGAAACCAAAACCATGAGCCTAAGAAGTCCATAGCAGATGCTATAGCTCCTAAAGCACCAAACAGGGAAACAACAGAGCAACATTCAAAAGGGTGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGACAGTGTTGAAGATGATTCTAGTGATGATGACGATGACGATGAAGATGAAGAATCTTTGCCTCAGTACCGATTTCGTGATTGTGTCTATTTCATCATGTGGTGGGGTTATTGGAGCAAAAATATGGGCTCTATTATATGTGCTCCAGATGGCAGTTTCTAG 894 0.4463 MAAPNRIERAHQMYRDGSYEEALGFYTEAIALAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVSRLLELNPSSEVYQNLQARLKTQLALAPIPESEEEFQEQEDEEPEVISQGENENEEMGEKYSSISNIRTDQKVELGKGIIIADCAPHETDLKFSSKQGRNQNHEPKKSIADAIAPKAPNRETTEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDDDEDEESLPQYRFRDCVYFIMWWGYWSKNMGSIICAPDGSF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02467 297 MobiDBLite consensus disorder prediction 127 162 - -
Gma15g02467 297 Gene3D Tetratricopeptide repeat domain 2 146 IPR011990 GO:0005515
Gma15g02467 297 SMART tpr_5 74 107 IPR019734 GO:0005515
Gma15g02467 297 SMART tpr_5 3 36 IPR019734 GO:0005515
Gma15g02467 297 SMART tpr_5 40 73 IPR019734 GO:0005515
Gma15g02467 297 MobiDBLite consensus disorder prediction 191 207 - -
Gma15g02467 297 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 270 - -
Gma15g02467 297 MobiDBLite consensus disorder prediction 130 149 - -
Gma15g02467 297 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Gma15g02467 297 MobiDBLite consensus disorder prediction 191 236 - -
Gma15g02467 297 Pfam Anaphase-promoting complex, cyclosome, subunit 3 18 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02467 Gma-Chr15 51988097 51991185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02467 2 121 Calmodulin-binding Proteins AT3G25230 32.576 2.03e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02467 - - gmx:100792046 502.286