Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02465 ATGGTTCAGCCAACATGGTTATTTTCACTTTTGATACTAACGCTTCAATTATCAGCATCAGGGGTCAATTCCACGAAGTTCACTTTGGTTAACCAATGCAACTACACGGTGTGGCCAGCGTTAAGCGGAGATGATTATCTTTCAACGACTGGCTTCGTTTTGAGAAGTGGCGAATCTTCCACTGTGACTCCACCTGCAAAATGGAAAGGCCTGATCTGGGGCCGCACTCTCTGCACCAATAGTTCAGCCACGGGAAATTTCTCTTGTGTCACCGGTGATTGCGGTTCCGGAAAGATAGCATGTTACGGAAGAACAGCTTCTATGCCGCCGGTCACGCGTCTAGAGTTTTCCTTAAGCGACACCAATTTTCCTGACATTTATGATGTGAGCCTAGCTGTCGGATTCAATGTGCCGGCGATAATTGTTCCCATAAGCAGCAGCAGCAAGTGTAACAGCACGGGGTGTGCGGTCGATATGAATAGAGTGTGTCCGACGGAGCTAAAGACAATAAAAAATGGACAAGTGGTGGGGTGTCAGAACCCCAACCCCTGTATTGGTGATGCGAGTTCCAACTGCGAACCAAGCGTGTACTCGAAAATATTCAAGACTTCATGCCCGCAAGCCTTCAGCTACCCAAAAGACGACCGAACCAGCACGTTCATCTGTTACGATCCTGTCGATTACAACATTGTCTTTTGTCCTACATCTAGCAACACCAACACCAGCCAAAGTGTTGGGGACTCACTCATGGCTGGAAATGGGACATCTCGGTGGCTTTCTCCTTCAGGTGATTTTGCATTTGGGTTTTACCAACTTCCTAATGAGTTTTTCTTGTTGGCTGTTTGGTATGACAAGATGCCAAATAAGACCATTATTTGGTTTGCAAATGGAGACAACCCTGCTCCTATAGGATCAAGGTTAGAACTAAATGACTCTGGACTAGTGCTCAATAACCCCCAAGGTTTAGAGCTATGGAGATCAAATTTTGTATCAGGTACAATTTTTAATGGTCTAATGAACGATGATGGAAATTTTCAACTCTTAGACCAAAATTCTGTGTCACTATGGGAGACTTTCACCCATCCAACTGACACGTTAGTACCTAATCAAGTAATGGAGTTAAATGGAAAACTTTTTTCACGACGAGGAGAGTTTAACTTCTCTCATGGAAGATTCAAACTTCATTTACAAGAGGATGGAAATCTTGTGCTCAGCCTCAATTTGCCTAGCAACTACAGTTATGAGCCTTACTATGATACTGGCACTGCTGATGCTAATAGCCAAACAAATATTGACATGAAATTGATATTTGACAAATCAGGCTTCTTATACATACTGAAAAAAAGTGGGGAGAAGTTTTATATTACCAAGCCAAATGAGACGATCTCAACTAATGACTTCTACTACAAAGCAACGATCAATTATGATGGAGTTTTTACCGTATCATATTACCCCAAAGATCTAAGAAAAGGACAAGGATGGGTCACTACAAAGACTATACCAGAAAATATTTGTTTGAGTTCTACATTCACAGATGGTGAAGGTGTTTGTGGGTTTAATAGCATATGCAATCTCAAAGCTGACCAAAGGCCAATATGTAACTGCCCAGAGAGATATTCTTTAATTGATTCAAATAACATGTATGGTGGTTGCATACCAAAGCTGACCTCTTTCCCAAACCCAAATGGGAAGAAAGATCATGATGTCTTGATCGTTATGTTATCAGTTCTTTTGGCCGGCTCTGTGTTAATCATTTTGATGTTGGTTGGTGCATTATATTTTGGTTTCTCGTGCAACCGCAAGAAGATCGAAAGTAGTAGAACCAACAAAAGTGTTGCTAAAAAGAATTTGCATGACTTTACCTTCAAGGAACTTGTGGAAGCAACAAACAACTTTAGAGAAGAATTGGGAAGAGGATCTTTTAGCATTGTATACAAAGGAACAATAGAGATGACTAGTGTGGCGGTTAAAAAATTAGACAAGTTGTTCCAAGATAATGACAGGGAATTTCAAACTGAGGTGAATGTAATAGGCCAAACTCATCATAGGAACCTAGTTCGTCTACTTGGATATTGCAACGAAGGACAACATCGAATTCTGGTATACGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCTCTTCTTTGAAATCCAATTGGGGCCAACGATTTGACATTGCCCTTGGGATTGCCAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCATTGCGACATAAAGCCACAAAATATACTTTTGGATGATCAATATAATGCTAGAATTTCAGATTTTGGGTTAGCAAAGCTGTTATTGATCAATCAAAGCCGCACTGAAACTGGAATTAGAggaacaaaaggaaagAATGTAGAAAAGGAGCTTGTTAATGAAGAAAAAGGGATATTGACTGATTGGGCATATGATTGCTACAAGACTAGAAGACTAGAAATTCTTTTAGAAAATGATGACGAAGCTATTAATGACATAAAGAGCTTTGAAAAACTTGTGATGATTGCTATTTGGTGCATTCAAGAACATCCTTCTCTTAGGCCAACAATGAAGAAGGTTTTGCTGATGCTAGAAGGAAATGTTGAAGTTTTAACACCCCCAAGTCCCTACCTTCATGGTTCTATTAGTGAAAATTGA 2661 0.4017 MVQPTWLFSLLILTLQLSASGVNSTKFTLVNQCNYTVWPALSGDDYLSTTGFVLRSGESSTVTPPAKWKGLIWGRTLCTNSSATGNFSCVTGDCGSGKIACYGRTASMPPVTRLEFSLSDTNFPDIYDVSLAVGFNVPAIIVPISSSSKCNSTGCAVDMNRVCPTELKTIKNGQVVGCQNPNPCIGDASSNCEPSVYSKIFKTSCPQAFSYPKDDRTSTFICYDPVDYNIVFCPTSSNTNTSQSVGDSLMAGNGTSRWLSPSGDFAFGFYQLPNEFFLLAVWYDKMPNKTIIWFANGDNPAPIGSRLELNDSGLVLNNPQGLELWRSNFVSGTIFNGLMNDDGNFQLLDQNSVSLWETFTHPTDTLVPNQVMELNGKLFSRRGEFNFSHGRFKLHLQEDGNLVLSLNLPSNYSYEPYYDTGTADANSQTNIDMKLIFDKSGFLYILKKSGEKFYITKPNETISTNDFYYKATINYDGVFTVSYYPKDLRKGQGWVTTKTIPENICLSSTFTDGEGVCGFNSICNLKADQRPICNCPERYSLIDSNNMYGGCIPKLTSFPNPNGKKDHDVLIVMLSVLLAGSVLIILMLVGALYFGFSCNRKKIESSRTNKSVAKKNLHDFTFKELVEATNNFREELGRGSFSIVYKGTIEMTSVAVKKLDKLFQDNDREFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFSSLKSNWGQRFDIALGIARGLVYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSRTETGIRGTKGKNVEKELVNEEKGILTDWAYDCYKTRRLEILLENDDEAINDIKSFEKLVMIAIWCIQEHPSLRPTMKKVLLMLEGNVEVLTPPSPYLHGSISEN 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02465 886 CDD B_lectin 259 362 IPR001480 -
Gma15g02465 886 Gene3D - 363 499 IPR036426 -
Gma15g02465 886 ProSiteProfiles Bulb-type lectin domain profile. 234 360 IPR001480 -
Gma15g02465 886 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 558 792 - -
Gma15g02465 886 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 156 555 - -
Gma15g02465 886 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 793 886 - -
Gma15g02465 886 SMART serkin_6 630 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02465 886 SMART tha2 27 234 IPR001938 -
Gma15g02465 886 Gene3D Transferase(Phosphotransferase) domain 1 705 792 - -
Gma15g02465 886 ProSiteProfiles Protein kinase domain profile. 630 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02465 886 Gene3D Phosphorylase Kinase; domain 1 594 704 - -
Gma15g02465 886 SUPERFAMILY Protein kinase-like (PK-like) 622 875 IPR011009 -
Gma15g02465 886 Pfam D-mannose binding lectin 290 375 IPR001480 -
Gma15g02465 886 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gma15g02465 886 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gma15g02465 886 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Gma15g02465 886 PRINTS Pathogenesis-related protein signature 50 59 IPR001938 -
Gma15g02465 886 PRINTS Pathogenesis-related protein signature 224 233 IPR001938 -
Gma15g02465 886 Pfam Thaumatin family 31 234 IPR001938 -
Gma15g02465 886 ProSiteProfiles Thaumatin family profile. 24 236 IPR001938 -
Gma15g02465 886 SUPERFAMILY alpha-D-mannose-specific plant lectins 277 422 IPR036426 -
Gma15g02465 886 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 558 792 - -
Gma15g02465 886 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 156 555 - -
Gma15g02465 886 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 793 886 - -
Gma15g02465 886 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Gma15g02465 886 Gene3D Transferase(Phosphotransferase) domain 1 793 876 - -
Gma15g02465 886 SUPERFAMILY Osmotin, thaumatin-like protein 26 234 IPR037176 -
Gma15g02465 886 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Gma15g02465 886 Gene3D - 240 362 IPR036426 -
Gma15g02465 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Gma15g02465 886 Gene3D Thaumatin 25 234 IPR037176 -
Gma15g02465 886 Pfam Protein kinase domain 633 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02465 886 SMART blect_4 240 362 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02465 Gma-Chr15 51956740 51973658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02465 612 868 Receptor kinase-like Gene Family AT1G60800 40.404 2.54e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma15g02465 Thaumatin 6.3e-53 CL0293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02465 - - gsj:114387079 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02465 15 51956740 51973658 Gma15g02465 15 51956740 51973658 ECH