Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02456 ATGCTTAACAATTTGTGTTTTCATGTGATAGATGAAGTTACTGAATCACCAGGAAAATATCGTAGTAGGATGGAGAAAGAGGCAATTGAGGGCAAGGGGATGAATGAAGTTCAAGAGCTAAAGGATAACCTTCTACGTAGATATAGCGGTTATATTATTAATCTGAAGCATGAAATTTCCAAAAAGAAGAAGAAAGAAAAACTGCCAAAAGAAGCAAAGCAAATCTTACTTGCATGGTGGAATATTAACTGTAAATGGCCATACCCAACGAAGCAAGGGTCACACAAAGAATGCAAAGCAAACAATCTGCACGGTCATATATTTGATCCTTCACCACGTTGGTCGTCGACGAGGAGATTCTTCACATCAAGTCATGGTGAAAAACGTACGTTGCGCATGTGGCAATACCCAAAGTCACGCAATTTCTCTATATCAACAACAAAATCTTGGACAAGCTATTGA 462 0.3853 MLNNLCFHVIDEVTESPGKYRSRMEKEAIEGKGMNEVQELKDNLLRRYSGYIINLKHEISKKKKKEKLPKEAKQILLAWWNINCKWPYPTKQGSHKECKANNLHGHIFDPSPRWSSTRRFFTSSHGEKRTLRMWQYPKSRNFSISTTKSWTSY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02456 153 Pfam ELK domain 39 60 IPR005539 GO:0003677
Gma15g02456 153 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 91 - -
Gma15g02456 153 SMART ELK_2 39 60 IPR005539 GO:0003677
Gma15g02456 153 Gene3D - 48 107 - -
Gma15g02456 153 ProSiteProfiles ELK domain profile. 39 59 IPR005539 GO:0003677
Gma15g02456 153 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 8 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02456 Gma-Chr15 51827419 51830184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02456 2 91 Homeobox Transcription Factor Family AT1G23380 45.361 9.52e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02456 - - gmx:102660098 280.026