Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02450 ATGGGTGTGAACGAAGATTTCAACAAGGATATTGATTATGATCATCATGAGTATGTGGATGATGATGATGTTCCTCTTCCGGGGTTTCGATTCCACCCTACAGATGAAGAACTTGTTAGTTTCTATCTTCAAAGGAAGCTTGACAAGAAACCCATCAGCATCGAGCTCATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCGAAAACCAGTGCCACTGGAGGAGAGAAAGAAGGGTACTTCTTTTGCAGAAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACTGGCTCAGGGTTCTGGAAAGCAACTGGCATAGACAAGCCAGTGTACTCACATGGAGGAGAAGGCAATGACTGCATTGGCCTCAAAAAAACACTAGTGTATTACCGTGGCAGTGCAGGCAAAGGCATCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCTTCTAACACAGACAACAACAACACCAACCTTCGCAGCTCCAAGAATTACGTAGATGTTCCCCAAGAAGCCGAAATTTGGACATTGTGTCGAATTTTCAAGAGAAATGTCTCACAGAGGAAGCACACGCCAGACTTGAAACAAATATCAGCTAAGCGCCAATCCATTCATGACAAGAGTTCAAGAATGAGCAATGTGGAGTTCAATACTACTAATCAAGAATCATATATAAACTTTGGTGGCCACTATCACAATGAGCAGAAACCTACCATTAACTACACAAACAGTGATCAAAGGAATCAGTATCATGTGATGACTCATCATCAGTTGTGTGCTCCGGTGGCACAGCAGCATCAGCAACCTCAACAACTAACTTCACCATCTTCTAACTTTTGGATTAACAACCCACCTGGGAACGACTTCTTCACGTTTGATAACTGGGATGAGCTTGGATCTTTAGTGAAGTTTGCGGTTGATTCGCCTAGCTTGTAG 957 0.4305 MGVNEDFNKDIDYDHHEYVDDDDVPLPGFRFHPTDEELVSFYLQRKLDKKPISIELIKQIDIYKYDPWDLPKTSATGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGIKTDWMMHEFRLPSNTDNNNTNLRSSKNYVDVPQEAEIWTLCRIFKRNVSQRKHTPDLKQISAKRQSIHDKSSRMSNVEFNTTNQESYINFGGHYHNEQKPTINYTNSDQRNQYHVMTHHQLCAPVAQQHQQPQQLTSPSSNFWINNPPGNDFFTFDNWDELGSLVKFAVDSPSL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02450 318 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 312 - -
Gma15g02450 318 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 15 312 - -
Gma15g02450 318 SUPERFAMILY NAC domain 24 190 IPR036093 GO:0003677|GO:0006355
Gma15g02450 318 Gene3D NAC domain 34 194 IPR036093 GO:0003677|GO:0006355
Gma15g02450 318 Pfam No apical meristem (NAM) protein 27 155 IPR003441 GO:0003677|GO:0006355
Gma15g02450 318 ProSiteProfiles NAC domain profile. 25 190 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02450 Gma-Chr15 51756050 51758388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02450 22 199 NAC Transcription Factor Family AT5G39820 59.474 5.41e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma15g02450 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02450 - - gmx:100790471 654.44