Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02441 ATGCTAAGACAAAGTGGTCATCATGTGCAGGTGAAGTTCACAGTTGATGAACTCCGGCAGATTATGGATCGCAATCACAACAATAGGAACATGTCTGTTATTGCTCATGTTGAACATGGAAAATCCACACTGATAGATTCTCTTGTGGCTGCTGCTGGTATCATAGCACAAGAGACTGCAGGAGATGTGAGGATGACAGATACTCTTCAATATGAAGCTGAGCGTGGAATCACTATCAAGTCCATTGGCATCTCTCTCTACTATAAGATGCAAGAGGGTGATTTGAAGAGTTTCAAGGGAGACTGCAAAGAGAATGATTTCCTCATAAATCTCATTGACTCGCCGGGGCATGTGGACTTCTCATCTGAGGTCACAGCTGCACTTCACGTCACTGATGGAGCACTTGTTGTGGTGGATTGTGTTGAGGGTGTCCGTGTCCAGACAGAAACTGTACTGAGACAGGCCCTTGGAGAAAGGGTTAAGCCTGTTTTGGTTGTTAACAAGATGGATAGGTTTTTTTGCTGGCTTGCATGGATGGGGCTTTACACTCACCAACTTTGCCGAGATATGATGAGTAGGCTTTGGGGTGAGAATTTCTTTGACTCTGCTACCAGAAAGTGGACTAACAAGCACACCGGGGTAAACTTGAAGTCAGAGGAAAAGGAGTTGACAGGAAAGGCTTTGATGAAGCATGTTATGCAGAGTTGGGCACCGGCAAGCAGCGCCCTTCTGGAGATGATGATATATCACCTTCCCTCTCCTGCCAGGGCTCAGCAGTATCGTGTGGAGAATTTGTATGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGATCCTGAAGGTCCTCTGATGCTCTATGTCTCAAAGATGATTCCAGCATCTGATAAAGGTAGATTTTTTTCTTTTGGCCGTGTATTCTCTGGCAAGGTTTCAACTGGTTTGAAGGTCAGAATCATGGGACCAAACTATGTCCCAGGGGAGAAAAAGGACTTGTATGTTAAAAGTAAACAAGAAACAGTTGAGGAGGTGCTTTGTGGCAACACAGTAGCTATGGTGGGTTTGGACCACTTCATCACCAATAATGCTACATTGACAAACGAGAAAGAAGTTGATGCACACCCCATTCGAGCTATGAAGTTTTCTGTCTCTCCAGTGGTAAGTGTTGCTGTTACAACCAGGGTTCCATCTGATCTTCCTAAACTTGAGGAGGGCCTAAAACGTTTAGCAAAGTCAAACCCTATGGTGGTCTGCACACTGCCAGAGACAGGAGAGCATATAATATCTGCTGCTGGTAAGCTTCATCTTGAAATCTGCTTGAAGGACTTGCAGGATGATTTTATGAATGGAGCAGAGATTTCAATATCTGATCCTATTCTCTCTTTCCGTGAGACTGTTTTAGAGAGGTCTTGCCATACAGTGATGAGCAAGTCACCTAACAAACACAACCGTCTGTACATGGAAGCAAGGCCCATGGAGGCTGGACTTGCAGAGGCTATTGATGATGAAAAGATTGGACCAGGGGTTGACCCCAAAAATAGGTCTAAAATATTGTCAGAAGAGCTTGGTTGGGACAAGGATCTGGCCTTGGCCCCGATGGTAAAGGACCCAACATGGTGGTGGATACTTGCAAGGGCATACAGTACCTCAATGAAATCAAAGACTCAGTTGTTGCTGGGTTTGAGGGAGCATCAACTGGAGGTCCAATGGCTGGTGAGAAAATGTGAGGGGTGTGCTTCAAGATTTAGAGGTGGTCAGATCATTTCAACTGCTAGAAGAGCCTGCTATGCAGCCATGCTGACAGCAAAACCAAGACTTCTTGAACCTGTGTATCTGGTGGAAATACAGGCACCTGAACAGGCTCTTGGTGGTGTATACAGTGTTCTTAACCAGAAAAGAGGGCATGTGTTTGAGGAAAGCCAGAGGCCTGGCACCCCACTTTACAATGTCAAGGCATATTTTCCTGTTATTGAGTCATCTAAATTCAATGAATCACTAAGGGCTAAAACTGGGAGAAAGGCTTTCCCCCAGTTAGTATTTGACCATTGGGATATGGTGCCATCTGATCCACTAGAACCTGGCACTCCTGCTGCTGCTCTTGTTGCGAAGATAAGAAGGAAGAAAAGCTTTGATGTAGAAATGAGGCCTTTCTTTGAGTTTGAGGACAGACTTTGA 2184 0.4515 MLRQSGHHVQVKFTVDELRQIMDRNHNNRNMSVIAHVEHGKSTLIDSLVAAAGIIAQETAGDVRMTDTLQYEAERGITIKSIGISLYYKMQEGDLKSFKGDCKENDFLINLIDSPGHVDFSSEVTAALHVTDGALVVVDCVEGVRVQTETVLRQALGERVKPVLVVNKMDRFFCWLAWMGLYTHQLCRDMMSRLWGENFFDSATRKWTNKHTGVNLKSEEKELTGKALMKHVMQSWAPASSALLEMMIYHLPSPARAQQYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVSKMIPASDKGRFFSFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSKQETVEEVLCGNTVAMVGLDHFITNNATLTNEKEVDAHPIRAMKFSVSPVVSVAVTTRVPSDLPKLEEGLKRLAKSNPMVVCTLPETGEHIISAAGKLHLEICLKDLQDDFMNGAEISISDPILSFRETVLERSCHTVMSKSPNKHNRLYMEARPMEAGLAEAIDDEKIGPGVDPKNRSKILSEELGWDKDLALAPMVKDPTWWWILARAYSTSMKSKTQLLLGLREHQLEVQWLVRKCEGCASRFRGGQIISTARRACYAAMLTAKPRLLEPVYLVEIQAPEQALGGVYSVLNQKRGHVFEESQRPGTPLYNVKAYFPVIESSKFNESLRAKTGRKAFPQLVFDHWDMVPSDPLEPGTPAAALVAKIRRKKSFDVEMRPFFEFEDRL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02441 727 CDD aeEF2_snRNP_like_IV 460 615 - -
Gma15g02441 727 Pfam Elongation factor G C-terminus 608 694 IPR000640 -
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 211 726 - -
Gma15g02441 727 SUPERFAMILY Ribosomal protein S5 domain 2-like 464 610 IPR020568 -
Gma15g02441 727 Gene3D Elongation Factor G (Translational Gtpase), domain 3 387 463 - -
Gma15g02441 727 CDD EF2_II 286 371 - -
Gma15g02441 727 CDD eEF2_snRNP_like_C 611 690 - -
Gma15g02441 727 TIGRFAM small_GTP: small GTP-binding protein domain 29 171 IPR005225 GO:0005525
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 211 726 - -
Gma15g02441 727 Gene3D Translation factors 254 385 - -
Gma15g02441 727 Pfam Elongation Factor G, domain III 388 450 IPR041095 -
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 187 214 - -
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 11 186 - -
Gma15g02441 727 SUPERFAMILY EF-G C-terminal domain-like 385 461 IPR035647 -
Gma15g02441 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 252 IPR027417 -
Gma15g02441 727 Pfam Elongation factor Tu GTP binding domain 27 252 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 SMART EFG_C_a 608 697 IPR000640 -
Gma15g02441 727 Gene3D - 471 534 IPR014721 -
Gma15g02441 727 PRINTS GTP-binding elongation factor signature 126 137 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 PRINTS GTP-binding elongation factor signature 30 43 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 PRINTS GTP-binding elongation factor signature 74 82 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 PRINTS GTP-binding elongation factor signature 110 120 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 PRINTS GTP-binding elongation factor signature 162 171 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 11 186 - -
Gma15g02441 727 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 26 255 IPR000795 GO:0003924|GO:0005525
Gma15g02441 727 SUPERFAMILY Translation proteins 253 377 IPR009000 -
Gma15g02441 727 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 187 214 - -
Gma15g02441 727 Gene3D - 600 713 - -
Gma15g02441 727 SUPERFAMILY EF-G C-terminal domain-like 611 704 IPR035647 -
Gma15g02441 727 Gene3D - 12 221 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02441 Gma-Chr15 51632937 51635340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02441 190 727 Eukaryotic Initiation Factors Gene Family AT1G56070 64.570 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02441 K03234 - gmx:100787816 1136.32