Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02418 ATGGCTTCCGAGAACGTAAGCCCCGAGACAGTATCCAAAGCCGTCGATGCTCTCCTCCAATGGCGCCGCTCCCAATCGGAGATTCAGAAACCAAAACTCTTGGGCGAAGACGAAGAATTCGTGTACCTGATCCTCACGCTGAAGAAGATCCCTTCAAAATCCCGAGTTAACCCTCACAAGATTCCTCTCCCGCACTCCCTCATCTCCCCTTTCTCCGAGCAGTGCCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTCACCAAAGCCCAGGCCCAAGCCAAAATCCAGTCCGAATCCATCCCCGTCCACAAAGTCCTCAAGCTCTCGAAACTCGCCTCCGATTACCGCCCCTTCGAGGCGAAGCGAAAACTCTGCGATTCTTATGATTTGTTTTTTGCAGAGAAGAGCATTGTGCCGCTCCTGCCGCGGCTTCTGGGGAAGAGTTTTTTCAAGAAGAGGAAGATTCCGGTGCCGGTGGACCTGAAGAAGGGGAGCTGGAAGGAGCAGGTGGAGAGGGCCTGCTCGTCCGCGATGCTGTTCATGAGGACGGGGACCTGTAGTGTGGTTAGGGTTGCCAAGGTGAGGATGGAGAGGGATGAGATTGTGGAGAATGTCGTTGCCGCGATTGAGGGGATTGTGGAGGTTGTGCCCAAGAAGTGGGGCAATGTGAGGTCGCTGCATTTGAAGCTGCTGGAGAGCGTGGCTCTGCCGGTCTACCAGACTGTTCCTGATGTGAAGTTGAAGATTGAGGGATTTAAGGTTGAGGAGAAGAAGAATGAGAAGGAGAGGGATGGTGAGGTTAGTGATTCGATTGAGGGAGGGACGGAGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAGGTTAGGTATATGGATGAGAATGTTGTGGAGGCTGGGATGGAAGATGAATTGGCGAGTGATGACGATGATAGTGAAGATGAGATGGTGAGTAAGAAGAGGAAGAAAGGGGTTTCGAGTGAGTTGAGTGGTGTTGAGCAATTGAAGAAGTTGGTATTTAATGAGTTGAGTGCCAATGGGAAGAAGAAGTCAAAGAAGGGCTGCTTGTCTGTTGGGAAGGGGGTTAAGGGAGGTTTGATTGAGGGGAGTGGAAGTGAATTGGTTGTGAAGGATGAGGAGTCGGGGGTGAAGAAGAAGAAGAAGAAGAGAGGGGATGTGAAGGCTACGAAAAGTGTAAAGGCTAAGATAATTAAGAAGGCTGTGTGA 1227 0.5143 MASENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSKSRVNPHKIPLPHSLISPFSEQCLILDDRPNKARVTKAQAQAKIQSESIPVHKVLKLSKLASDYRPFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKGSWKEQVERACSSAMLFMRTGTCSVVRVAKVRMERDEIVENVVAAIEGIVEVVPKKWGNVRSLHLKLLESVALPVYQTVPDVKLKIEGFKVEEKKNEKERDGEVSDSIEGGTEKKKKKKGRIHEVRYMDENVVEAGMEDELASDDDDSEDEMVSKKRKKGVSSELSGVEQLKKLVFNELSANGKKKSKKGCLSVGKGVKGGLIEGSGSELVVKDEESGVKKKKKKRGDVKATKSVKAKIIKKAV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02418 408 MobiDBLite consensus disorder prediction 259 280 - -
Gma15g02418 408 CDD Ribosomal_L1 11 239 IPR028364 -
Gma15g02418 408 Pfam Ribosomal protein L1p/L10e family 36 235 IPR028364 -
Gma15g02418 408 MobiDBLite consensus disorder prediction 302 322 - -
Gma15g02418 408 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 5 298 - -
Gma15g02418 408 Gene3D - 85 177 IPR016095 -
Gma15g02418 408 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 298 - -
Gma15g02418 408 MobiDBLite consensus disorder prediction 259 279 - -
Gma15g02418 408 SUPERFAMILY Ribosomal protein L1 36 240 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02418 Gma-Chr15 51317325 51318930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02418 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 4.13e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02418 K14775 - gmx:100782862 687.952