Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02403 ATGATGGCATTGGAGTGTAGTAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTGTTTTTTTGCCTTGGCATTGTCCTTGTAAATTCGGTTAATGAAGAGGGTTTGAGTCTTTTGAGGTTCAAAGCTTCCCTTCTTGACCCAAACAACAATCTCTATAACTGGGATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTATTGCACAGGTTCAGTGGTAACTTCTGTGAAACTTTACCAACTCAATCTGTCTGGTACTTTGGCTCCTGCCATCTGTAATCTTCCAAAGCTTCTTGAGTTGAATTTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGATGGTTTTGTTGACTGTGGTGGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGAACCCAATTTGGAAAATCACAACACTTAGAAAGCTTTACCTGTGTGAAAATTACATGTATGGTGAAGTGCCAGCGGAGCTTGGGAATTTGGTATCTCTAGAGGAACTGGTCATATATAGCAATAATTTGACTGGAAGAATTCCATCATCAATAGGAAAGTTGAAACAGCTTAAAGTTATAAGGTCAGGTCTAAATGCTCTCTCAGGGCCAATACCTGCTGAAATCAGTGAGTGCCAGAGCTTGGAGATATTGGGGTTGGCACAGAATCAGCTAGAAGGTTCAATCCCAAGGGAGCTTGAAAAGCTTCAGAACCTTACCAATATACTTCTGTGGCAAAACTATTTCTCTGGGGAGATTCCTCCAGAGATTGGAAACATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTGAGTGGTGGTGTCCCTAAGGAACTGGGAAAGCTGTCGCAGTTGAAGAGGTTGTACATGTACACCAACATGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAAAGCTATTGAGATAGACCTTTCTGAGAACCATTTGATTGGGACCATTCCAAAGGAGTTGGGAATGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAAAACAATCTGCAGGGTCATATTCCAAGGGAACTCGGTCAGTTGAGGGTGCTAAGAAATTTAGATCTGTCACTGAATAACTTGACAGGTACAATTCCACTGGAGTTTCAAAACCTTACATACATGGAGGATTTGCAGCTATTTGACAACCAACTTGAAGGTGTGATTCCTCCTCATCTTGGAGCTATTAGAAACCTAACTATTCTTGATATATCTGCAAACAATCTTGTTGGTATGATACCTATCAATCTTTGTGGATATCAGAAGCTGCAATTCCTGAGCCTTGGTTCAAATAGGTTGTTTGGAAACATTCCTTACAGCCTCAAAACATGCAAATCTCTTGTGCAGCTTATGCTGGGGGACAACCTTTTGACAGGAAGCCTACCTGTTGAATTGTATGAGCTTCACAATCTCACTGCACTTGAACTCTATCAGAACCAATTTTCGGGGATAATAAACCCGGGGATAGGCCAACTCAGGAATCTAGAGAGGCTTGGCTTGTCGGCTAACTACTTTGAAGGCTATCTCCCTCCTGAGATTGGAAATTTGACACAACTTGTGACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGTATAGCTCATGAGTTGGGAAACTGTGTAAGATTGCAGAGGCTTGATCTTAGCAGGAATCACTTCACTGGAATGCTTCCAAATCAAATTGGCAACTTGGTGAACTTGGAGCTGTTGAAAGTTTCTGATAACATGCTCTCAGGAGAAATACCAGGCACTTTGGGGAATCTTATTAGGCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCCCTTCACTTGGGAAAACTTGGAGCTCTTCAGATTGCACTTAACCTGAGCCACAACAAACTTTCTGGCTTAATTCCTGATAGCCTTGGGAACTTGCAAATGCTAGAGTCCCTTTATCTAAATGACAATGAACTTGTTGGTGAGATTCCTTCATCAATTGGTAACCTTCTCAGTCTTGTAATATGCAATGTATCAAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAACGGCTTGTGCCGTGTTGGTACCAATCACTGCCATCCATCTCTATCTCCCTCTCATGCTGCAAAACATAGCTGGATCAGAAATGGTTCATCAAGGGAAAAGATAGTGAGTATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTTATTTTCATAGTGTGTATATGTTTTGCCATGAGGCGTGGTAGCCGTGCTGCTTTTGTTTCACTTGAAAGGCAAATAGAGACTCATGTCTTGGATAACTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACAGGAAATTTTTCGGAAGCTGCAGTTCTAGGAAGAGGAGCTTGTGGAACTGTTTACAAGGCTGCTATGAGTGATGGTGAAGTGATTGCTGTTAAGAAGCTGAATTCGCGTGGAGAAGGAGCAAATAATGTTGACAGAAGCTTCCTTGCTGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTGTATGAATACATGGAAAATGGAAGCCTTGGAGAACAACTTCATTCAAGTGTAACCACTTGTGCATTGGATTGGGGTAGTAGATATAAAGttgctcttggagcagcagaaggcttatgctatcttcattatgattgtaagcctcagatcatccatcgagatataaagtcaaacaacatattacttgatgagatgtttcaggctcatgttggagactttggcttggcaaagttgATTGACTTTTCCTACTCAAAATCTATGTCTGCTGTGGCTGGCTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAGCTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGATTTAGTGACTTGTGTGAGAAGAGCAATTCAGGCATCAGTACCAACATCTGAATTGTTTGACAAGAGATTGAATCTTAGTGCACCAAAAACAGTTGAAGAAATGTCTCTTATTCTCAAAATTGCCCTGTTCTGCACCAGCACATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTAATTGATGCTAGGGAATATGTCAGCAACTCACCAACCTCTCCTACATCAGAATCTCCATTGGATGAGGATGATGGCATTTCTTCCAAAGATGGTGGTCTTGAGTTGTAA 3351 0.4017 MMALECSSFHFLNGVYMVLFFCLGIVLVNSVNEEGLSLLRFKASLLDPNNNLYNWDSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGTLAPAICNLPKLLELNLSKNFISGPIPDGFVDCGGLEVLDLCTNRLHGPLLNPIWKITTLRKLYLCENYMYGEVPAELGNLVSLEELVIYSNNLTGRIPSSIGKLKQLKVIRSGLNALSGPIPAEISECQSLEILGLAQNQLEGSIPRELEKLQNLTNILLWQNYFSGEIPPEIGNISSLELLALHQNSLSGGVPKELGKLSQLKRLYMYTNMLNGTIPPELGNCTKAIEIDLSENHLIGTIPKELGMISNLSLLHLFENNLQGHIPRELGQLRVLRNLDLSLNNLTGTIPLEFQNLTYMEDLQLFDNQLEGVIPPHLGAIRNLTILDISANNLVGMIPINLCGYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELYQNQFSGIINPGIGQLRNLERLGLSANYFEGYLPPEIGNLTQLVTFNVSSNRFSGSIAHELGNCVRLQRLDLSRNHFTGMLPNQIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISLHLGKLGALQIALNLSHNKLSGLIPDSLGNLQMLESLYLNDNELVGEIPSSIGNLLSLVICNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTNHCHPSLSPSHAAKHSWIRNGSSREKIVSIVSGVVGLVSLIFIVCICFAMRRGSRAAFVSLERQIETHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAAMSDGEVIAVKKLNSRGEGANNVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSVTTCALDWGSRYKVALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEMFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTCVRRAIQASVPTSELFDKRLNLSAPKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPTSPTSESPLDEDDGISSKDGGLEL 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02403 1116 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Gma15g02403 1116 SMART LRR_typ_2 360 383 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 288 312 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 168 192 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 552 575 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 624 648 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 504 528 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 96 120 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 576 600 IPR003591 -
Gma15g02403 1116 SMART LRR_typ_2 649 673 IPR003591 -
Gma15g02403 1116 SMART serkin_6 807 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02403 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1092 - -
Gma15g02403 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Gma15g02403 1116 SUPERFAMILY RNI-like 365 688 - -
Gma15g02403 1116 Pfam Protein kinase domain 809 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02403 1116 ProSiteProfiles Protein kinase domain profile. 807 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02403 1116 Gene3D Ribonuclease Inhibitor 283 385 IPR032675 -
Gma15g02403 1116 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Gma15g02403 1116 Gene3D Ribonuclease Inhibitor 185 282 IPR032675 -
Gma15g02403 1116 SUPERFAMILY L domain-like 34 313 - -
Gma15g02403 1116 Gene3D Phosphorylase Kinase; domain 1 771 885 - -
Gma15g02403 1116 Gene3D Ribonuclease Inhibitor 386 722 IPR032675 -
Gma15g02403 1116 Gene3D Transferase(Phosphotransferase) domain 1 886 1099 - -
Gma15g02403 1116 MobiDBLite consensus disorder prediction 1089 1116 - -
Gma15g02403 1116 PANTHER OS07G0152200 PROTEIN 18 1092 - -
Gma15g02403 1116 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Gma15g02403 1116 Pfam Leucine Rich Repeat 631 649 IPR001611 GO:0005515
Gma15g02403 1116 SUPERFAMILY Protein kinase-like (PK-like) 784 1081 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02403 Gma-Chr15 51084064 51088547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02403 53 1086 Receptor kinase-like Gene Family AT1G73080 37.535 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma15g02403 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02403 - - gmx:100818311 2122.82