Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02347 ATGCTCCCCACCCTCAATGCCGCCGGCGACGTCCTTCTCACCGACCCCCTCTCGCCGCGGCTCGGTAATATCGGCCATGGAGATTTAGTGCTGCTTCGGTCCCCTCTGAACCCTAAGATCAGGCTGATGAAGCGCGTGGAAGGGGACAACGTCACTTACTTCGACGCTTTGCACTCTAAAGCTGCTCAAGTTGCAGTGGTGCCAAAAAGACATGTTTGGATTCAAGGGGATAACATTTATGCTTCCCGTGATTCACGGCATTTTGGTCCTGTTCCATACGGTCTTATAGAAGGAAAAGTGTTTTTCCGGGTATGGCCTCCTGATAGCTTTGGGCTAGACCAATGA 345 0.5217 MLPTLNAAGDVLLTDPLSPRLGNIGHGDLVLLRSPLNPKIRLMKRVEGDNVTYFDALHSKAAQVAVVPKRHVWIQGDNIYASRDSRHFGPVPYGLIEGKVFFRVWPPDSFGLDQ 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02347 114 SUPERFAMILY LexA/Signal peptidase 1 112 IPR036286 -
Gma15g02347 114 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 112 - -
Gma15g02347 114 CDD S26_SPase_I 1 100 IPR019533 GO:0004252|GO:0006465
Gma15g02347 114 Pfam Signal peptidase, peptidase S26 61 105 IPR019533 GO:0004252|GO:0006465
Gma15g02347 114 Gene3D Umud Fragment, subunit A 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02347 Gma-Chr15 49840959 49843331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02347 1 111 MADS-box Gene Family AT1G29960 49.565 8.44e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02347 K09647 - gmx:100807792 238.039