Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02339 ATGAGGAATTCCCTGGTTATAGCCTTTTCCATAACCATATGCTTCATCGCTTTTGTGATATCGAAGATTGTTATCTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACATTTGATTCATGAAGAAGGTTATCCAGGAGGGAAGATAGTAATATTTAGGTCCTCAGTGCTTAAATCTCTCACAACTGATGTGATCTTAAAGAAGACACAGAAACTGAACAGCAAGGACATCATTGGATCAGGTGGTTATGGTGTGGTTTATGAACTAAAACTAGATGACTCCACGGCCTTGGCAATAAAAAGACTAAATCGCGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAGCACCGCAACATTGTGACACTTCATGGATATTACACTGCACCACTCTACAATCTTCTCATATATGAGCTAATGCCCCATGGAAGTTTGGATTCCTTTTTGCATGGTAtATCAAGGGAGAAGGTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAgctagaggaatatcatatcttcaccatgattgcatccctcacattatccacagagacataaagtcaagtaacatattgttggatcaaaatatggatgcccgagtttctgattttggattagcAACGTTGATGCAACCAAATAAAACTCATGTCTCAACAATTGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCAACACTGAAAGGGGATGTTTACAGCTTTGGAGTTGTTTTGCTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGGACTATGCTTGTCACATGGGTGAAGGCTGTTGTTCGAGACAAAAAGGAGGAGTTAGTTCTCGATAATAGCTTAGGTAATTGTTCAATGAAAGAGGTAAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAACCATGGCTGAAGTTGTCACTTTGCTTGAGCAAACAGAACCAGATAAACTCATTACTGCATCATGA 1062 0.3597 MRNSLVIAFSITICFIAFVISKIVISVLLYKRWRRKHLIHEEGYPGGKIVIFRSSVLKSLTTDVILKKTQKLNSKDIIGSGGYGVVYELKLDDSTALAIKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYTAPLYNLLIYELMPHGSLDSFLHGISREKVLDWPTRYRIAAGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMDARVSDFGLATLMQPNKTHVSTIVAGTFGYLAPEYFDTGRATLKGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRDKKEELVLDNSLGNCSMKEVNKVFNIAMMCLEPDPLKRPTMAEVVTLLEQTEPDKLITAS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02339 353 Pfam Protein kinase domain 74 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02339 353 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 346 - -
Gma15g02339 353 PANTHER BNAA07G39120D PROTEIN 1 346 - -
Gma15g02339 353 SMART serkin_6 72 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02339 353 ProSiteProfiles Protein kinase domain profile. 72 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02339 353 Gene3D Phosphorylase Kinase; domain 1 40 147 - -
Gma15g02339 353 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Gma15g02339 353 SUPERFAMILY Protein kinase-like (PK-like) 52 343 IPR011009 -
Gma15g02339 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gma15g02339 353 Gene3D Transferase(Phosphotransferase) domain 1 148 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02339 Gma-Chr15 49706094 49708159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02339 5 343 Receptor kinase-like Gene Family AT2G35620 46.491 2.38e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gma15g02339 Pkinase 7.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02339 - - gmx:100305410 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02339 15 49706094 49708159 Gma15g02339 15 49706094 49708159 ECH