Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02320 ATGCAATTTGGCAATGGCAAGACAAAACAAGAAGTAGAATCTGTTGAACACTTACATGAAAAAGCATTTGCTGAGACTGTTACTCCTGCAGATGCAACATTGGACGAACCTTTGCAGCCACCAAGCGGGGTTCAAGACGAACAAGACCAAAAGTTCAGTGTGTGTGCCGACCTTGTTCGTGGTGCCAAGGACAAGCGCCTCACGGTGAAGGGACCTGTTAGGATGCCAACTAAAGTCCTTAACATCACCACCAGGAAATCCCCATGTGGTGAAGCTTTTGATAAATTTAACACAACGCACCAACAGTTGCCAAATATTTTGATTTCTGGTCTGCTTAACATTTCAAAACTCACACTTCTGAGAGAGCCAAGGAGAAGAGAAAGAGGGAGGGGATATGATAACTCACAGTTCACGATGATAGGTCTGGACTCAGGTGCGACAGAGACTGCAGAGGCCTTCGGAGCTGCAACGGGCTTCAATTCGCGTTAG 489 0.4642 MQFGNGKTKQEVESVEHLHEKAFAETVTPADATLDEPLQPPSGVQDEQDQKFSVCADLVRGAKDKRLTVKGPVRMPTKVLNITTRKSPCGEAFDKFNTTHQQLPNILISGLLNISKLTLLREPRRRERGRGYDNSQFTMIGLDSGATETAEAFGAATGFNSR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02320 162 MobiDBLite consensus disorder prediction 24 50 - -
Gma15g02320 162 Pfam Ribosomal protein S10p/S20e 53 98 IPR027486 -
Gma15g02320 162 ProSitePatterns Ribosomal protein S10 signature. 62 77 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma15g02320 162 PANTHER RIBOSOMAL PROTEIN S20, PUTATIVE, EXPRESSED-RELATED 53 98 - -
Gma15g02320 162 Gene3D Ribosomal protein S10 domain 46 122 IPR036838 -
Gma15g02320 162 SUPERFAMILY Ribosomal protein S10 53 92 IPR036838 -
Gma15g02320 162 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 53 98 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02320 Gma-Chr15 49121367 49125393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02320 29 109 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 50.000 2.01e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02320 K02969 - gmx:100810631 92.8189